Polyodon spathula (Mississippi paddlefish): 121327142
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Entry
121327142 CDS
T07273
Name
(RefSeq) claudin-23-like
KO
K06087
claudin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04382
Cornified envelope formation
pspa04514
Cell adhesion molecule (CAM) interaction
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121327142
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121327142
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121327142
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121327142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121327142
04147 Exosome [BR:
pspa04147
]
121327142
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121327142
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121327142
Exosomal proteins of colorectal cancer cells
121327142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
DUF4064
Claudin_2
DUF2207_C
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
121327142
NCBI-ProteinID:
XP_041126900
LinkDB
All DBs
Position
2:89149337..89150141
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AA seq
261 aa
AA seq
DB search
MRTPAVMIIGIVLAPCGLVFDLVSTLAPNWREVRNIKGRAQDEVLQQGIWDICQAFDTSR
TLKCGQKDENYFKEQVVTSAKGLMIASLIATMAGIVVASLGIRCWEETPNLLVAGLGGIL
IFISGILCIIPVAWYTNLLNSIKASGSDIRVGYCIVLGYIGSCFMVIGGGALIMCLFQLC
FKKKGQLTNSHSNKYYHNNPSSSRSIIKTVDGREFTMPQQPTSLSRPIEVDDFTVPLGKP
APKKTFNITDFTTNEPCDSDF
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccccagcggtcatgattatcgggattgttctggccccttgcgggttggtattc
gatctcgtttctactctggccccgaactggagggaggtgaggaacattaagggcagggca
caagatgaggtgctccagcagggaatctgggatatctgtcaagcgtttgatacttcccgt
actctcaaatgtggacaaaaagatgaaaactactttaaggaacaagtcgttacctcagcc
aagggtctaatgattgcctcgttaatcgcaaccatggcagggattgtggtagcgtcccta
gggatccggtgttgggaagaaacgccgaacctgttggtggctggattgggagggatcttg
atcttcatttcaggtatcttgtgtattattccagtcgcttggtacaccaaccttctgaac
tcaatcaaagcgtcgggctcggatattcgtgtggggtactgcatcgtcctgggatatatc
ggcagctgtttcatggtcattggtggcggggccttgattatgtgtttgttccagttgtgc
tttaaaaaaaaggggcaactgaccaacagccactccaacaaatactaccacaataaccca
agttcatccaggtccattataaagacagttgatgggcgtgagtttaccatgccccagcaa
cctacatccttgagtagaccgattgaggtcgacgattttactgttcccctgggaaagcct
gcacccaaaaaaacatttaacatcaccgacttcaccacgaatgaaccgtgcgattcagat
ttttaa
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