Polyodon spathula (Mississippi paddlefish): 121327205
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Entry
121327205 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family F member 3-like
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pspa03012
]
121327205
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121327205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
SMC_N
AAA_21
AAA_22
AAA_29
AAA
MMR_HSR1
RsgA_GTPase
NACHT
AAA_23
ATP-synt_ab
AAA_15
DUF1672
AAA_16
TXNDC16_3rd
DUF87
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121327205
NCBI-ProteinID:
XP_041127020
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All DBs
Position
14:39212611..39222544
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AA seq
714 aa
AA seq
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MATYVEILSSEFPEIDSEVFDYITGVLDCGGADFLDGEEVFEAVGGVLQGVSADSKNEDD
VRDICQQMFNTLKLNDCNSAKQQVLLDAPVQLSALSSARDCGTASNDIQGIWMIKRGQNS
KAVDSKRLEKAEAKLKAKHERRTEKDSQKVTAPLVLEEASASQASNKKDTRIETSGKNKT
YDIRIENFDVSYGERSLLQGAEVTLSYGRRFGLVGRNGLGKTTLLKMMASRSLRVPTHIS
ILHVEQEVAGDETPALQSVLESDSVREGLLREERELNARISSGQADGMESVKLTEVYAKL
EEIEADKAPARASVILAGLGFSAKMQQQPTKEFSGGWRMRLALARALFAKPDLLLLDEPT
NMLDIKAILWLENYLQTWQSTILVVSHDRNFLNAVATDIIHLHSQRLDTYRGDYENFVKT
KEDRQKSQLREYEAQKQYRDHIQVFIDRFRYNANRAAQVQSKLKLLEKLPELKPVEKETE
AVLRFPDNFEKLSPPVLQLDEVEFYYSPDRHIFKNLCVSADLESRICIVGENGAGKSTML
KLLMGELSPVSGVRHGHRNLKIGYFSQHHVDQLDLNVNSVELLLNKFPGRTEEEYRHQLG
GYGITGELAVRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALAKALNK
FKGGVVLVSHDERLIRMVCKELWVCENGTVRRIDGGFDDYREILQEQFRKEGYL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctacgtggagattctgagcagcgagtttcccgaaatcgacagtgaagtcttc
gattatatcacaggtgttctggactgcggaggggctgatttcttggacggggaggaagtc
ttcgaagccgtcggtggggtcctacagggggtgtctgccgactccaaaaacgaggatgat
gtccgggacatctgccaacagatgttcaacacgttgaagctcaatgactgtaattcagcc
aagcagcaagtgttgctggacgccccagttcagctgtcggctctcagttctgcgagagat
tgtgggacggcatcaaatgacattcaaggcatttggatgatcaagagaggtcagaattca
aaggcggtagattcaaagagactggagaaagctgaagccaaactgaaagcaaaacatgag
cggaggacagagaaggattcccagaaagtaactgccccactggtcctggaagaagcttcg
gccagtcaagcctccaacaagaaggacactcgcatcgagacgtctgggaagaacaagaca
tacgatatccgtattgagaactttgatgtctcctatggagaacgctctctgctgcaaggg
gcggaggtgacgctgtcgtacggccgccgcttcggtctggtggggaggaatggcctgggc
aagaccaccctgctgaagatgatggcgagccgcagcctgcgcgtgcccacgcacatcagc
atcctgcacgtggagcaggaagtggcaggagacgagacgccggccctgcagagcgtgctg
gagagcgacagcgtgagggaggggctgctgagagaggagagggagctcaacgcacgcatc
agcagcggacaagcggacgggatggagagtgtgaagctgacagaggtctatgccaagctc
gaagagattgaagctgacaaagcgccagcaagagcatcggtgatcctggctgggttgggc
ttctctgctaagatgcagcaacagccaaccaaggagttctctggaggctggagaatgagg
ctggcattagccagagcactgtttgcaaagcctgatcttctgttacttgatgagccaaca
aacatgttggatatcaaggccattctgtggctggagaactacctgcagacgtggcagtcc
acgatcctggtggtgtcccacgaccggaacttcctgaacgcagtggcgacggacatcatc
cacctgcactcgcagaggctggacacgtaccgtggggactacgagaacttcgtgaagacc
aaggaggaccggcagaagagccagctgcgcgagtacgaggcgcagaagcagtacagggac
cacatccaggtgtttatagacaggttccggtacaatgcaaaccgggccgcccaagtgcag
agcaagctgaagctgctggagaaacttcctgaattgaaacccgtggaaaaggaaacggaa
gctgttttacggtttcctgataactttgagaagctctcccccccggtactgcagctggac
gaggtggagttttattactccccggatcggcacatattcaagaatctgtgtgtctctgcc
gacctggagtccagaatctgcatcgtgggtgagaatggtgctgggaaatccacgatgttg
aagctgctcatgggagagctgagtccggtcagtggagtacgacatggacacaggaatctg
aagattggttatttcagccagcaccacgttgatcagctcgacctgaacgtgaactcagtg
gagctactgttaaacaagttcccaggccggaccgaggaggagtacaggcaccagctggga
gggtacgggatcacaggggagctcgcggtccgccccgtcgccagcctgtccggggggcag
aagagcagggtcgccttcgcacagatgaccatgccatgccccaacttctacattctcgat
gagccgacgaatcacctggacatggagacaatcgaggccctggcgaaggcactgaataag
tttaaggggggggtcgtgctggtttcccacgacgaacgactcatccgcatggtgtgcaag
gaattgtgggtctgcgagaacgggacggtccggagaatcgacggcggctttgacgattac
cgagagattctacaggagcagttccgcaaggagggatatttataa
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