Polyodon spathula (Mississippi paddlefish): 121327225
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Entry
121327225 CDS
T07273
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04382
Cornified envelope formation
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121327225
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121327225
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121327225
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
121327225
NCBI-ProteinID:
XP_041127046
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All DBs
Position
14:complement(12149009..12165076)
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AA seq
1195 aa
AA seq
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MSQHSSEGLSSYKPTPGEAKQFNQVILVYLELTNTNFLIICLSFTQVYCKTLRLRRSAMW
SALTLWSGIFLFSLPDVHGTFRYEPDCKCNGKASHCMYDPEGYICLNCIDNTDGRNCEKC
KSGFFRQRPEDRCQPCRCNTMGSLNAQCDNYGRCSCKPGVMGDKCDRCQSGSALTQAGCG
GRCRSRASSLGAGNPMDCMPCFCYGHSSDCTFAEGYSAYNITSTFDNDPDGWRASFKSGS
HVQFRWSPKHRDVFVTSMDNNPIYLLAPDSFLGNQVLSYGRNLSFSFTVGRGGRRPSPED
VVLEGAGLRVAAPLADLGTTLPCGKMRAYTFRLDEQPGSKWRPLLSALQFHKLLNNLTAI
KIRATYGEKSYGYLDNVHLESARRGAGAPASWVEECSCPMGYRGQFCQECAPGYRRDSPS
SGSFSACVPCNCRGGTCDQDTGDCYSGDETPVVQCPAGTYNSPQNARTCLRCPCAPGVSC
AIAPGTLEVACNRCPVGTTGSRCEMCEDGYYGDPLGERGRPRPCQRCRCNDNIDPNTVGN
CDRLSGECLKCLYNTAGFNCEQCSEGFYRSTSIPNPAEGCTPCNCNPLGSLSPQCSKNGQ
CQCKEGHEGTKCEQKTACPACYSQVKYQMERHLLKLRDTEALFRTVDTSRAPFSEVEVEK
AVREAEKNIADLKRDTDQLSGSDKVLLSRLADISNTQSTQTRNLDGVSRTVDGMKSLAQQ
YQYQADTVKGLISSARQTVDKARVEMRQVELPFADAGTGTNSLSDLAHVATTLADRHRTE
AEGIERAAKTSGTSANEAYQLMQSVINGENKVASSIQDLNTMYNSDIATVNDLENQAARL
SSAGERASRLATKTFSDLSGIQMINPSSLQNEMKRLTQEAKLLQPNAEGKLSSIQKLNQE
VAADESEAKKLLAKGISDQKLGDQLLARANVAKAEALRALNDGQANLGKVEDVLTKLQEF
NGQLNQNKKEAEDAMDKIPFIRGLVREATQTNKQAETLLGNADKDVTKAIQNARDAGDIA
ENTGTEAQNSQLKLNGLFNKVLALDNDISGLKGATLNIQEQLATAENNANQDAEAVKQAS
AKATAAYDSSVQTKGAVQDTLSIINNLLNLLDQPGSLDEGRLMQLEGSIADSMEQVESQL
KPRMADLELMEARQRQRITALTTDIDNILNDIQNLEEIRDKIPEGCFNTAPIEKP
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacattcgtcagaaggactaagttcatataaaccaacacctggggaagccaaa
cagtttaatcaggtgattctggtctacctggagttaacaaacactaacttcctaataatc
tgcctcagctttactcaggtttactgcaagactcttcgtctcaggaggagtgcaatgtgg
tctgcgttgacattatggtctggaatcttcttattcagcctgcctgatgtacatggtacc
tttagatatgaacctgactgtaagtgcaatggtaaggcttcccattgtatgtacgacccc
gagggatacatctgtttgaactgcattgataacactgatgggcgcaactgtgaaaagtgt
aagagcgggttcttccgccagaggcctgaggaccggtgccagccatgccgctgcaacact
atgggatccctgaatgctcaatgtgacaattacgggcgttgcagctgcaaaccaggagtg
atgggtgataagtgtgatcgctgtcagtccgggagtgctcttacacaagctgggtgtggt
ggcagatgtcggtcgcgtgccagcagcttgggggcaggtaaccccatggactgcatgccg
tgtttctgctatgggcattcttccgactgtaccttcgcagagggctacagtgcttacaac
atcacttccacctttgataatgaccccgatggatggcgagcttctttcaaaagtggttcc
catgtgcagttccgctggtcccctaagcaccgtgatgttttcgtaacatccatggacaac
aatccaatctacctgctggcgccagattcgtttttggggaaccaggtgctgagctatgga
cggaacctctccttctcattcacggtggggcgaggagggcggaggccatccccagaagac
gtggtgctggagggagcagggctgcgggtggcagctcccctggcagacctgggaacaacc
ctgccctgcggcaagatgagagcctacaccttcaggcttgatgaacaaccaggcagtaaa
tggagaccactactcagcgcattacaatttcataaactgttgaataacttgacggccatt
aagattcgagccacctatggggaaaagagctatggataccttgacaatgtgcatctggag
tcagctcgtcgcggtgctggagcccctgcctcctgggttgaggagtgtagctgtcccatg
ggctaccggggtcagttctgccaggaatgtgctccagggtaccgaagagactctcctagt
agtgggtccttcagtgcctgtgtaccctgtaactgccggggaggcacctgcgaccaagac
actggagactgttactctggagacgagaccccggttgtccaatgcccagctggtacctac
aacagcccacagaacgccagaacctgcctgcgttgcccctgtgccccaggagtcagctgc
gccatcgctccaggcaccctagaagtggcatgtaacaggtgccctgtgggaacaacaggc
tcccgatgtgagatgtgtgaagatggttactacggcgaccccctgggtgagcggggccgc
ccccggccttgtcagcgctgccggtgcaatgacaacatcgaccctaacactgtgggaaac
tgcgatcgtttgagcggggagtgcctcaaatgcctctacaacactgctggcttcaactgc
gagcagtgcagtgagggcttctacaggagcacctccatccccaaccctgctgagggctgc
acaccatgtaactgcaaccctctgggctcactgtcaccacagtgcagcaagaatggccag
tgtcagtgtaaagaaggacatgaaggaacaaagtgcgaacaaaaaactgcttgcccagcc
tgctacagccaagtgaaataccagatggagaggcatttgctgaagctgagggatacggaa
gctctgtttcgaacagttgataccagccgtgcccccttctctgaggtggaggtggagaag
gccgtcagagaggctgaaaaaaacattgcagacctaaagagagacacagaccaattatca
ggttctgacaaagtgctgctcagtcgcttggctgatataagtaacacacagtctactcag
acaagaaacctggatggtgtttcccggacagtggatgggatgaagtcgttggctcagcag
tatcagtaccaggctgacactgtcaaggggctgatcagcagtgccagacagaccgtggac
aaggccagagtggagatgagacaagtggaacttccatttgcggacgctgggacaggcaca
aacagcctctcagatttggcacatgtggcaaccacattagcagacagacaccgcactgag
gccgaaggaatcgagcgagcagctaaaaccagcggcacctctgcaaatgaagcctatcag
ctgatgcagtcagtgatcaatggggagaacaaggtggccagcagcattcaggatctgaac
acaatgtataacagtgatatagccacagtcaatgacctggaaaaccaagctgccaggctg
agctctgctggtgaaagggcaagccgtttggcgacaaagacctttagtgatctctcaggg
attcagatgattaaccccagctctctgcagaacgagatgaaaaggctcactcaggaggct
aagctcttgcaacccaatgcagagggaaagctctccagtattcagaaattaaaccaagag
gtggcggctgatgagtctgaggccaagaaactgctggccaaagggatatctgaccagaag
cttggagatcagctcctagcaagagcaaatgttgccaaggctgaggcattgagggcattg
aacgacgggcaggctaacctaggaaaggtggaggacgtcctgaccaagcttcaagagttc
aatggacagctaaatcaaaacaagaaggaagctgaagacgcgatggataaaatccctttc
attagaggccttgttagagaggccacacagacaaacaagcaggcagagacgttgctgggg
aatgcagacaaagatgtaaccaaggcgattcaaaacgcaagagacgctggggacatagct
gaaaacacgggcacggaagcacaaaactctcaattaaaattgaatgggttgttcaataag
gtgttggcattagacaatgacataagtggcttgaagggggcaacgttaaacattcaggaa
cagttggccacagcagaaaataatgcaaaccaggatgcagaggccgtgaaacaggcttca
gcgaaggcaactgcagcttatgacagctcagtgcaaactaaaggagccgttcaagacaca
ttgtccatcatcaacaacctgctcaatctacttgaccagccaggcagtctagatgaaggc
agactgatgcagctggaggggtcgatagcagacagcatggagcaagtggagagtcagctg
aaacccagaatggcagacctggaactaatggaggccagacagcgacagagaattactgcc
ctcaccactgacattgacaacatcttaaacgacattcaaaacctggaagagattcgggat
aaaatccctgaggggtgcttcaacactgcacccatagagaaaccctaa
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