Polyodon spathula (Mississippi paddlefish): 121327228
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Entry
121327228 CDS
T07273
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B-like isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121327228
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121327228
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
121327228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Arm-DNA-bind_1
Motif
Other DBs
NCBI-GeneID:
121327228
NCBI-ProteinID:
XP_041127048
LinkDB
All DBs
Position
14:complement(33556048..33564707)
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AA seq
481 aa
AA seq
DB search
MLTLPASDLYLLQMERDIKFNSEELDEIASKRAELDKWREIFSSQGLELNDASIKKQKQK
HQESRKSEDESEDGAGATSSTKSHGQVADFNVLYCIPKPVTISSSLGGIPITVDMAGNLR
KILFGNTFHIFNYEWKKSYFKFREPFSDLSYALKAERGGSSAIQMAVQANIIRYLLFTGS
NETGTVCLQDLYDVSQKKQEEALAAALTDILWSAGDLQSGSVCLVSTDSYFTPSTEYKVD
NFTERVQLFKFIEKEIMQKFIYEHIQCFKEEGSHGVILFLYSLIFSRTIDRLREDLDSTT
PHLLHSSLGNFVCRQALLNLMLTGRASPNVFNGNIQYDDQGSPLPLPLHGVLIRSDVGYL
HWNREVLQHGKLPMVGSMLKTPKLPIWLCNINGTYSVLFSINSSLLSDWKMEHLFDLYLY
NGQPAQNHTVILTIDTHSHHWEEGHDKGDGDLEKRFPSVEMTIRTKWEGAAIDWNGTVPF
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttaacactgccggcctctgatttgtacctcttgcagatggagcgtgatattaaattc
aacagtgaggaattggatgagattgcaagcaaaagagcggaactggataaatggagggaa
atctttagctctcaggggttggaattaaatgatgcttcaattaagaaacagaaacagaaa
caccaagaaagccggaagtcagaggatgagagtgaagatggagctggagcgacttctagc
accaagtctcatggacaagttgctgactttaatgtcctatattgtattcccaaacccgtt
accatctcttctagtttgggcggcattcctatcacagtggatatggcagggaaccttaga
aagattttgtttgggaacaccttccacatcttcaactacgaatggaagaaatcctacttc
aagttccgggagcctttctctgacttgtcgtacgccctgaaagcagaaaggggaggatcc
agtgcaatccagatggctgtgcaggcaaacattatcagatacctgctcttcacaggaagc
aacgaaacaggaacagtctgcttacaagatttgtatgacgtcagtcagaaaaaacaggaa
gaggccctggcagccgccctgaccgatattctgtggtcagcaggcgacttacagagtggg
tcagtctgccttgtgtccacagactcctactttacaccaagcactgagtacaaagtggac
aacttcacagaaagggttcagctgtttaaattcattgaaaaagaaatcatgcagaaattc
atctacgaacatatacaatgttttaaagaagaaggaagccatggagtgattctgttcctg
tacagtttgattttctcgaggactattgacaggctaagagaagaccttgactccactaca
ccccacctcttgcattcaagtctggggaattttgtttgtcggcaggctctgttgaacctg
atgttgacaggcagagccagtcccaatgtcttcaatggcaatattcaatatgatgaccaa
ggcagtccactgccactcccgctgcacggagtcctcatccgcagtgatgtggggtactta
cactggaaccgagaggtgctgcaacatggcaagctcccaatggtgggaagcatgctgaaa
acccctaaactgccaatctggctgtgcaacatcaatggaacctatagcgtgctgttcagt
ataaacagctcactcctgtccgactggaaaatggaacacctgttcgacctgtacttgtac
aacggacagccagcacagaaccacacggttattcttaccatagacactcactctcatcac
tgggaagaggggcatgataaaggcgacggagatctggagaaacggttcccttctgtggag
atgacaataaggactaaatgggaaggagcagccattgactggaatggaacggttccgttt
ttctaa
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