Polyodon spathula (Mississippi paddlefish): 121327234
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Entry
121327234 CDS
T07273
Name
(RefSeq) E-selectin-like
KO
K06494
selectin, endothelial cell
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121327234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121327234
04090 CD molecules [BR:
pspa04090
]
121327234
04091 Lectins [BR:
pspa04091
]
121327234
Cell adhesion molecules [BR:
pspa04515
]
Lectins
Selectins and C-type lectins
121327234
CD molecules [BR:
pspa04090
]
Proteins
121327234
Lectins [BR:
pspa04091
]
C-Type lectins
Selectins
121327234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
EGF_2
hEGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121327234
NCBI-ProteinID:
XP_041127082
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All DBs
Position
14:complement(11353202..11358057)
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AA seq
546 aa
AA seq
DB search
MVVTVGKCLKQIPKTSVRLCLLSLICYEITMLKCVEGWTYHYSSDKMNWEDARKWCQDHY
TDMVAIQNQEENVYLNEVIPFVHGYYWIGIRKINETWTWVGTNQILSEEAENWAENEPNN
GKTAEDCVEIYINRTKDSGKWNDEPCKKQKTALCYSAACHASSCNGHGACIEMINNYTCK
CHEGFYGPKCENVVDCATMEKPQKGLMDCSHPFGFFSYNSACDFSCEAGYKLNGSDRVQC
TASKEWTSQSPVCEAVGCNTLTAPQNGDMVCSHPIGNFSFKSTCEFNCEEGYSLIGSSKL
ACTSSGKWDEDQPQCEAVKCHTLEAPQNGSINCSDFGYNSSCQFSCAEGFALKGAESLTC
RASGQWTGEPPQCEAIKCESPKTVAHMVLNCTHPIESLVYNSTCLLSCEKGFVLNTSGSL
QCTSSGKWSAETPTCKAVTCNPLTMLKKVFMNCSHPFEHFGYKSKCSFYCAEGRLSGSSN
LECNSSGKWTAEIPVCEEDPSTSTDYRNIGLVTASACLLSGLSFIMWLVKRLRKAKKFDL
ERCEEH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgactgttggaaaatgtttgaagcagatccccaagacttcggttcgtctgtgt
ttattgagccttatttgttatgagattaccatgctgaaatgcgttgaagggtggacatac
cactactcttctgataaaatgaactgggaagatgcaaggaaatggtgccaagaccactac
actgatatggttgcaatccagaaccaggaagaaaatgtttatctcaatgaagtgattcca
tttgtccatggatattactggattgggattaggaaaataaatgaaacctggacctgggtg
ggaaccaaccaaatactcagtgaagaagcagagaactgggctgaaaatgaacccaataat
ggtaaaactgctgaggattgtgtagagatttatataaatagaacaaaggattctggaaaa
tggaacgatgaaccttgtaagaaacaaaaaactgcattgtgttattcagctgcttgccat
gcatcttcatgcaatggccatggtgcatgtatagaaatgatcaataattacacttgcaag
tgtcatgaaggattctatggacccaaatgtgaaaacgttgtggactgtgccactatggag
aaaccccaaaaagggcttatggattgctctcatccttttggatttttttcttataactct
gcctgtgacttcagctgtgaagcaggatacaaattaaatggctcagacagagtccagtgc
acagcttccaaagagtggacatcgcagtctcctgtatgtgaagctgttgggtgcaacact
cttacagcccctcagaatggtgatatggtttgctctcatccgattggcaatttcagcttt
aaaagcacctgtgagtttaactgtgaggaaggatactcactcattggatctagcaaactt
gcttgcacttcgtcagggaaatgggatgaagatcaaccacaatgtgaagctgtgaagtgc
cacacactcgaagccccccagaatggcagcataaactgctctgactttgggtacaactcc
agctgccagttcagctgtgcggaggggtttgctttgaagggagccgagagtctgacctgt
agagcatctgggcagtggacaggagagcctcctcaatgcgaagctattaaatgtgaaagc
ccaaagacagttgcccacatggttttgaactgcacccatcccattgagagtctcgtctac
aattccacttgcctgctgagctgcgagaaggggtttgtgttaaacacctcaggaagtctt
cagtgtacatcttctgggaaatggagtgcagaaacaccaacctgtaaagctgtaacatgt
aatccactgacaatgctgaagaaagtcttcatgaactgctctcatccatttgagcacttt
ggttacaagtcgaaatgctccttttactgtgcagaaggacgattgagtggatcaagtaat
ttggaatgcaactcttctgggaagtggacagcagaaataccagtgtgcgaagaagatccc
agcacctcgacagattacagaaacattggcctggttactgcgtcagcttgtctgttatct
ggactgagtttcataatgtggcttgtaaagcgccttcggaaagctaagaaatttgattta
gaaaggtgtgaggaacactga
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