Polyodon spathula (Mississippi paddlefish): 121327246
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Entry
121327246 CDS
T07273
Name
(RefSeq) retinal homeobox protein Rx-B-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121327246
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121327246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6866_N
Motif
Other DBs
NCBI-GeneID:
121327246
NCBI-ProteinID:
XP_041127103
LinkDB
All DBs
Position
2:complement(97117126..97119953)
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AA seq
308 aa
AA seq
DB search
MMDESLSLSGSLVRSPGNPSRIHSIDAILGFTKEDAILHSAFPSNGNSRHVKDLEQSNSR
NCCSKTSPVKKENHDLESFDSKCLSSSGSSISAGLPEGTETKNKILGEDHPEKKHRRNRT
TFTTFQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKREVSS
MKLQDSPMLAFNRSPQQSVMGNISSNLPLEHWLTPPMSTATTLQSLPGFLPTPKGMPSSY
TSPPFLNSSSMGHSLPHMGEMGPPPPYQCGGTTFLDKFSLEEADPRNSSIASLRMKAKEH
IQSFGKTW
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgaaagcttgtctctatcaggaagcttagtaagaagccctggaaatccgtct
agaatccacagtatagatgcaattttgggatttacgaaggaggatgctatcttacactca
gcgtttccttcaaatggaaattctaggcacgtcaaagatctagaacagagtaactcaaga
aactgctgcagcaaaacgtcacctgtgaagaaagaaaatcatgatttggaaagttttgat
agtaagtgtttaagcagttcggggtcttcgataagtgcaggtttaccagaaggaacagaa
actaaaaacaaaattctaggtgaagatcatcctgaaaagaaacacagacgcaacagaaca
acgttcacgactttccagctccacgagttggaaagagcctttgaaaaatctcattaccct
gacgtgtacagcagagaagaactggcgatgaaagtaaacctgccagaagtcagagtgcag
gtatggtttcaaaacagacgagccaaatggaggcgacaagagaaacgagaagtgagctca
atgaagcttcaagattccccaatgctggcttttaacagatctccccagcaatcagtgatg
ggtaacatcagcagcaatttgccactggagcactggcttacgccaccgatgtctacagcc
accacactgcagagcttaccgggattcttgcccactccaaagggcatgccaagcagctac
acatcaccgccgtttctaaactcgtcatccatggggcacagccttccgcatatgggtgaa
atgggcccaccccctccataccaatgtggcggaaccaccttccttgacaagttctctttg
gaagaagctgacccaagaaactctagcattgcatcgctgaggatgaaagcaaaggagcac
attcaatcttttgggaaaacctggtag
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