Polyodon spathula (Mississippi paddlefish): 121327306
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Entry
121327306 CDS
T07273
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121327306
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121327306
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
HTH_24
Motif
Other DBs
NCBI-GeneID:
121327306
NCBI-ProteinID:
XP_041127188
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All DBs
Position
14:complement(21021140..21022110)
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AA seq
237 aa
AA seq
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MSKSVDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGVEWKLLTESEKRPYIDE
AKRLRAQHMKEYPDYKYRPRRKPKNLLKKDKYFPLPYLGDRDHFKGFPVSSTDSLLSASE
KARAFLPPTSAPYSFLDPGQFSSNAIQKMTEMPHGLTPSTLSYPSSLGYQNGAFRSLSCP
SQHTHTHTSPTNPGYVVPCNCTAWSASSLQPPVAYILFPGMTKTGIDPYSSAHAAAM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtcagtggatcatattaaaagaccgatgaatgcgttcatggtttggtctcgg
ggtcaaaggaggaagatggcacaggagaaccccaaaatgcacaactccgaaatcagcaaa
aggctgggagtcgagtggaaactgctgacagaatcagagaagcgaccttacatagacgag
gcaaaaagactccgggcgcagcacatgaaagaataccccgactacaagtaccgaccgagg
cgtaagcccaagaatttgttaaagaaagacaagtacttccctctgccttaccttggagat
agagaccactttaaagggttcccagtctcttccacggactctcttttgagtgcttcagaa
aaagcccgtgcattcctgcctccgacctcggcaccttactccttcctcgaccccggccag
ttcagctcaaacgccattcagaagatgacggagatgcctcacgggctgaccccgagcact
ttgtcctacccctcttctctgggataccagaacggagctttcagaagtttgagttgcccc
agccagcacacccacacccacacgtcacccaccaatcctggctatgtggtgccatgtaac
tgtacggcctggtcagcgtctagtttacaacctccagttgcctacatacttttcccaggt
atgaccaagactggaatagacccatattcctcagcacacgcagcagctatgtaa
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