Polyodon spathula (Mississippi paddlefish): 121327317
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Entry
121327317 CDS
T07273
Name
(RefSeq) zinc finger and BTB domain-containing protein 38-like
KO
K10510
zinc finger and BTB domain-containing protein 38
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121327317
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121327317
04121 Ubiquitin system [BR:
pspa04121
]
121327317
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121327317
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121327317
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121327317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121327317
NCBI-ProteinID:
XP_041127204
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All DBs
Position
14:32060692..32082182
Genome browser
AA seq
1343 aa
AA seq
DB search
MTVMSPDTGDLMDSTHSQAILRCLNDQRTQALFCDVTVVVEDIKFKAHKNVLAASSLYFK
HAFSTQEVWVSGQVLQLPDIGSDVFAGILHFIYSAKVEITGTEDVKALIAAGKKLGIPFL
ENLRDWSHQGKQSFEAENSRGSSDSVPPADAVCSVQTIRSPLLKNTTNCGTSDQRTEESL
CLNGPRITNAFSIFEAGPNNDPFSPLDLRASAKRMQETEQFQIICPTLNAAAAKGKQTCA
LSEHSYAVSSTVDQVLKTTEHCETPVNEVRKDSPPTEVPTNHLMNQRCNPLKKRHILSSS
LGKVAGVQYTNKAHATLNLTPIPISHHNETAEVTSNGNVPQMITHNSTGSESVISAVAAE
PHVATYRCEYCSETFSNKAQLNIHTQVHKKHFVSHLACKFCHKKFTHLKRLRNHEQTCCK
AQLDATENESCEPQLSIANVDNTSSTDGSVQHARTEDKSGNCSGNHIDEDSSPVFTSLPD
NGEKVVDGQRMHVCSVCKRAYVTLSSLRRHANVHSWQRAYPCHYCNKVFALAEYRTKHEI
WHTGERRYQCIFCLETFMTYYILKNHQKSFHGIDPRLAVNKKSAHGGFKSNLYPFKLYRL
LPTTFRKKQYKTYSQTLAENAESNDPPFQVPLPPRPQNSLTTPSVNFENSIIGAQNSPDA
VCMGQPLFSMPLTFMATPNIVASVAPCVNLNQPSNPSHTLSSEAGGCPQTALSTTTQNTN
NLSTPCPANTSSTGSSVSYGFPGPSVIMQTNRVSSVIVHGNEMGVNDDKECSDVPFLEMT
GSSFSEPANDDKGHMRTYFKQDKLSGMQITETRADEMVQPEGFGDASNRITNILYPGSKT
ETYIAKPACPGPSFDSQVQPLCQITVKIGDEAMVRRRIKGSKLFQRKRKWSSLAGEDQSS
VTGTEGNDRNASLRARTDTTSVIENETYDDVTDRDTADKLWRPYYSYKSKKKTRGAKKLR
SKHRRKCKNLQIPARHLRSNAKDQDCLDGYIDTSYSLHDTAICNPAKLRKHLKKGAYKEP
YSCVMCQNVFSSLSALEVHKMSCHAKEKSYLCKTCGKQFSPHEIPYENHAFPLDKKEFVC
KNCVEDGSCFNNSLRSHNTEKCYRCSFCPQRFLYLATKKSHEKKHLEKHTKGYSCSYCPK
VCKSSAALGMHQKKHFIKREEEEQEQAGSHCGIAANESKLTAPQHSDADTVREPKLEQER
GVSNNRGFKEFRTPDLKTLTLSLEEGLPQTQVPLQSIWNTCPATLNDQLRGQLAEPWDQL
NQTNNDMTGKAYDEYSVQSVNAYQNPHVYSEQFAPLNMTSKMQTCSTHADFPKTEYKSPC
KEEPLVQPDYWSSEQIPTGDNSN
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcatgtctccagatacaggagatcttatggatagcacccattcccaggctatt
ctccgctgcttaaatgatcaacgcactcaggcgctgttctgcgatgtcaccgttgttgtg
gaagacatcaagttcaaggcccataagaacgtgttagcagcatctagcctttactttaag
catgcattttccacccaagaggtgtgggtttcaggtcaagtcttgcagctgccagacatt
gggtctgatgtatttgcagggatacttcactttatttacagtgctaaagtggagatcaca
ggaactgaagatgtaaaagctcttatagctgcaggtaaaaaattaggaattccctttctg
gaaaacctaagggactggagtcatcaggggaaacaatcctttgaagcagagaatagccgt
ggctcatctgattcagtcccgcctgcagatgccgtttgctctgtgcagacaattaggtct
cccttgctgaaaaatacaaccaactgtggcaccagtgaccaaagaactgaagagtctctc
tgtttgaatggtccaagaatcaccaatgcattttccatttttgaagcaggacccaacaat
gacccgttttctccacttgacttgagagccagtgctaaaaggatgcaggaaactgaacaa
ttccagattatatgccccactctcaatgcagcagcagcaaagggcaagcagacctgtgcc
ttatcagaacattcttatgctgtgtcttccactgtagatcaggtccttaaaacaacagag
cattgtgagacacctgttaacgaggtcagaaaagacagtccccccactgaagtacctact
aatcacctgatgaaccagcgatgcaatccactgaagaaacgtcatattctgagcagtagt
ctgggtaaagttgcaggggtacagtacaccaataaagcacatgccacactgaaccttaca
cccattccaataagtcatcacaacgagacagctgaagtcactagtaatggaaacgtccca
cagatgataacacacaatagcactggatcagaatcagtcatttctgctgtggccgcagaa
ccacatgtagccacttacagatgtgaatactgctctgagaccttcagcaacaaagcacag
ctgaacatccatacgcaggtacacaaaaaacattttgtcagtcatttggcatgcaaattt
tgccataagaaattcacgcacctaaaaaggctacgtaatcatgaacaaacatgctgtaag
gcacagcttgacgcaactgagaatgaaagctgtgagcctcaactcagtatcgctaacgta
gacaatacttccagtacagacggcagtgtgcagcatgcacgtacagaagacaaatcaggc
aactgctctggtaatcacatagatgaagacagttcaccagtgtttaccagtttaccagat
aatggtgagaaagtggttgacggacaaaggatgcatgtgtgcagcgtgtgtaaacgtgct
tatgtcacgctgtcaagtcttaggagacatgcaaatgtccattcatggcagagggcctac
ccatgccattactgcaataaagtttttgctttggctgaatatcgtaccaagcatgagatc
tggcacacgggtgaaaggagataccagtgtattttctgtttagagacttttatgacatac
tacattttgaaaaaccatcagaaatcttttcacggcatcgacccgaggctggctgtgaac
aaaaagtcagcgcacggtggttttaaaagcaacctgtatccttttaaactctacagactt
ctgcccacgacatttagaaaaaaacaatacaaaacatacagccagaccctcgctgaaaat
gcagaatccaatgatccgccttttcaagttcctttaccaccaaggcctcagaactcgtta
accaccccatcagtcaactttgaaaatagcattatcggtgctcagaatagtccagatgcg
gtttgtatggggcagccattattttctatgccattgaccttcatggccactccaaacatt
gttgcatcagtagcaccttgcgttaacttgaaccaaccaagtaatccaagtcatacgcta
tcttctgaagctggagggtgcccacagacagcactgagcacaacaacgcagaacaccaac
aacctttcaaccccatgtccggctaacaccagcagcacaggttcgtctgtaagttatgga
ttccctggaccctctgttataatgcagaccaacagagtctcgtctgtaatagtgcatggg
aatgaaatgggagttaatgatgacaaagaatgcagtgatgtgccattcttagaaatgact
ggtagcagcttttcagaacctgctaacgatgacaaaggtcatatgaggacatacttcaag
caagacaaactgtcaggtatgcaaataacagagacaagagcagatgagatggtccagcca
gaaggatttggtgatgcatctaatagaattacaaatatcctctacccaggcagcaaaaca
gaaacatacattgccaagccagcatgcccaggtccttcttttgatagtcaagttcaacct
ctttgccagataacagtaaaaattggcgatgaggctatggtgagaaggcgtattaaagga
tcgaaactcttccaaaggaaaagaaagtggagtagtttggcaggtgaggaccagagcagt
gtgacaggaacagaagggaatgacagaaatgctagtttacgtgcaagaacagatacaact
tcagtcatagagaatgaaacgtatgatgatgtgactgatcgcgacacagctgacaaactg
tggcgcccttattactcttacaaatctaaaaagaaaaccagaggagcaaagaaactgagg
tccaaacacaggagaaaatgcaagaatcttcagatccctgctagacatctgagatcaaat
gcaaaagatcaagactgccttgatggctacattgacacaagttacagtttgcatgacaca
gccatttgtaacccagcgaaattgagaaaacaccttaaaaagggtgcgtacaaagagcct
tattcctgtgtcatgtgccaaaatgtgttttcaagcttatctgcattagaggtacacaag
atgagctgccatgctaaagagaagtcttacctctgtaaaacttgcggaaagcaattttct
ccccacgaaattccttatgaaaaccatgccttccctttagacaaaaaagaatttgtctgt
aagaactgtgttgaagatggctcctgtttcaacaacagtttgaggagtcataacacagag
aaatgctaccgatgctctttctgcccgcagcgcttcttgtacttggctaccaagaagagc
catgagaagaagcatctagaaaagcacactaaaggctacagctgctcctactgtcctaaa
gtttgcaaatcctcagcagcccttggaatgcaccagaagaagcatttcattaaaagagaa
gaggaggaacaagagcaagcaggaagccactgtggcattgcagcaaatgaatccaaactt
actgcgccacaacacagtgacgcagacacagtcagagaacccaaactggaacaggaaaga
ggagttagcaacaacaggggctttaaagaattcagaacaccagatcttaagacactgaca
ttatctctagaggaaggcttgcctcagacacaagtacccttacaaagcatatggaacacc
tgcccagctaccttaaatgatcaacttcgtggtcaattggctgagccttgggaccagctg
aaccaaaccaataatgacatgactggaaaagcatatgatgagtacagcgtccaatcggtc
aatgcctaccagaaccctcatgtttactcagagcagtttgccccgttaaacatgacgagt
aagatgcagacatgtagcacacatgcagactttccaaagacagaatacaagtctccatgt
aaagaggaaccccttgtccaaccagactactggtcctctgaacagataccaacaggagac
aattcaaactga
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