Polyodon spathula (Mississippi paddlefish): 121327346
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Entry
121327346 CDS
T07273
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121327346 (sec16b)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121327346 (sec16b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
121327346
NCBI-ProteinID:
XP_041127239
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All DBs
Position
14:5393931..5409188
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AA seq
982 aa
AA seq
DB search
MDSRGYQWHDPRHPQTPSYYLQRPVSQSDYPYRPNTRDGYHNNNRPPPMPATQGDMYQPN
PDPRAGHWAQSGPREGYPVSSPPQRLEFQPTYISTPVSRSGYHTEKPLGRSYSRQGYDYP
SQNYPARDPREDYGYYDYGYQRGQHEYRDAERWNPINPHQDYWNQGPYQDRRYKQERIRD
TYREPHSDRYNEHAGSYQYDYNSEKNHSGGHAEETGGDHRELPLYGSGCLADAKASGLSS
SGYELSQYIDSTDQSHQPPQNHWSPVQTESAVMPALVAPLKFPLPHVRVSFCSGGQLVRV
SPNLPSQGEPALIEIHSLEVLLVDTQEQEEMRAFPGPLAREDLHKVDAITFSQHRADACW
KEETLRDKPSAALLWNLLVLLCRQNGRIVGSDIAELLMKDSMNPGHCEEGTGSLIDLTEE
TLLGHSMDMPDLLTGENTRSAESPAEALHKYTTLLLSGRKKEALEAAMRSGLWGHALFLA
SKMDNRTYTTVLNRFTGSLAVSDPLQTLFQLLSGRIPAVSTCCGDEKWGDWRPHLSVILS
NQTGDPGLNQKALITTGDTLAAKGLTDAAHFCYLMGRVHFGVYTVQSEKMVLLGSNHSHL
YFHSLPFRKFARTSAIQRTEVFEYCQQLGKPTFCIPSFQVYKLIYACRLLDYGLASQAFH
YCEVIGNAILKLDACSEVLLGELIKLAERLKLSDPQVHESPEEQQTIEPDWLKQLRVRHR
QLQMGDNSYIEKYQQPVPVTSIQHTENGPAAAGQTINKEEFPLPMDASEWPAVVYPSNPL
PLTSEQQTYQPSLPQQSTAPPQTVIEQGQSVPAAPPQAGGQAYPFQFTTDHTPQHLAQGS
EMEGFPMETQSTYGMNSIPGDYTSKEEKSQSEFSQPKPGDQEGEEQAKIQTDKGSRFGWF
GWFRSKPENHAQSQAGKKEELNETDPVVKQPNSTSAPPPTMIQTPTSSAGVNPFSRKAGR
KDASDDIRPVPGIGPPTITEGP
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggattccagaggttatcagtggcatgacccaaggcacccgcaaacaccatcttactac
ttacaaagacccgtctcccagtctgattatccttacaggcctaacaccagggatggctac
cacaacaacaacaggcctccccccatgcctgcaacccagggtgacatgtaccaaccaaac
ccagaccccagagctggacactgggcacagtcaggtcccagggaaggctaccctgtcagc
agccccccacaaagactagagttccaacccacctacatcagcactcctgtttccagatca
gggtaccacacagagaagccattgggaagatcctattcaaggcagggctacgattatcct
tctcagaactatccagcccgtgaccccagagaggattatgggtactatgactatggctat
caaagaggacagcatgaatacagagatgctgagcgatggaatcccatcaatccccatcaa
gattactggaaccaaggcccttaccaagataggcgatataaacaggagaggattcgtgat
acatatagggaacctcattcagacagatataatgagcatgcagggagttaccagtatgac
tacaactcagagaaaaaccacagtggaggccatgcagaggagactggaggtgatcacaga
gagctccccttgtatgggtcaggctgccttgcagatgctaaagcatctggactgtcctca
agtggttatgagctgagccagtatatcgattccactgatcagagccaccagcctccacag
aatcactggagtcctgttcagacagagagtgcagtgatgcctgcacttgttgcccctctc
aagtttcctctgccccatgtccgagtcagtttctgctctggaggtcagctggtccgagtg
agccccaacctgccttcacaaggagagccggcgctcattgagatacacagcctagaggtg
cttcttgttgacacccaggagcaggaagagatgagagccttccccggtcctttagcaagg
gaagatctccacaaggtggatgcaataacattttcccagcacagagcagacgcttgctgg
aaagaggagaccctgagagacaagccttctgctgccctcctctggaacctgctggtactg
ctgtgcagacagaatggaagaatcgtcggctcggatatagccgagctcctgatgaaagat
agcatgaacccagggcactgcgaggaaggcacagggagcctgatagacctgacagaggag
actctactgggtcacagcatggacatgccggacctgctgactggagaaaacacacgcagc
gcggaatcacctgccgaggcactgcacaaatacaccacgctgctgctctctgggaggaag
aaagaagctctggaggcagcaatgagaagtggcctttggggtcatgctttgtttttggcc
agtaaaatggacaacaggacctacaccactgtgttaaacaggttcaccggcagcctggct
gtgagcgatcctctgcaaacattgtttcagctgctctctgggcggatacctgcagtatct
acatgctgtggggatgagaagtggggagactggagaccccacctttccgtgatcctctca
aatcagacgggtgatccggggctaaaccaaaaagctctcattaccacgggggacacactc
gctgctaagggtttgacagatgctgcccatttctgctatttgatgggacgggttcacttt
ggtgtgtacacagttcaatcagagaagatggtactattaggcagcaaccacagccatctg
tattttcacagtctgcccttccggaagtttgccagaacttcagctatccagcgtacagaa
gtgtttgagtactgccagcaactgggcaaaccaactttctgtattccctctttccaggtt
tataaattgatttacgcatgtcgcttgctggactatggacttgcctctcaagcattccat
tactgtgaggttattggcaatgccatcctgaagctagatgcctgctctgaagtgcttctg
ggagagctgatcaagctagcagagagactgaaactttcagatccacaggtgcatgaaagc
ccagaagagcagcaaaccatagagcctgattggctgaagcaactgcgggtcagacacagg
caactacagatgggagacaatagctacattgaaaaatatcaacaaccagttccagtaacc
agcatccagcacacagagaatggcccagccgcagcaggtcaaactataaataaagaggag
ttcccgctacctatggatgcctccgagtggccagctgtggtctatccctcgaatcccctc
cctctcaccagcgaacaacagacataccagcccagcctccctcagcagagcaccgcccct
ccacagacagtaatagagcaggggcaaagtgtacctgcagcgcccccgcaggctggaggt
caggcttaccccttccagtttaccacagatcacaccccacagcacctggctcaggggagt
gaaatggaagggtttccaatggagacacagtcaacttatggaatgaactccattccaggg
gattacaccagcaaggaagaaaaaagccagtctgaattcagccagcccaaacctggagat
caggagggagaagaacaagcaaagatccagactgacaagggctctcgttttggctggttt
ggttggtttaggtcaaagcctgaaaaccatgcacagagtcaagcaggcaagaaagaggaa
ctgaatgaaaccgatcctgtggtcaagcagccaaactcaacatccgctcctccccccaca
atgatccagacacccacatcttcggcaggagtgaacccattttctagaaaagctgggagg
aaagatgcttcagatgacattaggccagtccctgggatagggcctcccacaatcacagag
ggaccatga
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