Polyodon spathula (Mississippi paddlefish): 121327357
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Entry
121327357 CDS
T07273
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121327357
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
121327357
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
New_glue
Motif
Other DBs
NCBI-GeneID:
121327357
NCBI-ProteinID:
XP_041127264
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All DBs
Position
14:complement(35383578..35387295)
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AA seq
510 aa
AA seq
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MLRNSLTFCTGRFIYASNVLFLLYLFASDTDMGLFSVQAALFVAIIIVAHISAKTTQFPK
YQYTKKPFQEVHQTTTTFSSAMTEETTDGTETSSSAVTDSTTFPDTVQHAFRTITTPAPS
GEHENFTLDYNECFFNFCECCPPEQGPKGQKGDRGLPGPRGERGEQGLRGLLGAAGPAGL
NGLQGEKGDKGDQGENGMNGIPGIPGKQGAKGDSGSKGEKGNLGFAGPPGDRGEKGDPCE
NGTKGERGEVGPPGVQGLSGEKGDTGGKGEMGDKGEPGAVGEKGGKGEKGEEAVKGEKGD
NGEPGISGANGANGLEGAKGDPGPSGDKGNPGTAGLPGPAGLRGNNGPKGDRGHPGMKGD
RGPRGFKGARGNSLVLKRSSFSVGLSPSKSFPPSGFPVKFDKIFYNGENHYDASIGKFNC
SIAGVYVFTYHVTVRNRPLRLVLVVDGSRKLRSRDSLYGQDIDQASNFILLKLNQGDQVW
LETLRDWNGVYASSDDDSTFSGFLLYSDEV
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttacgaaacagtctgacgttttgtactggaagatttatttatgcaagtaatgttctg
tttttactgtatttatttgcttcagatacagacatgggattgttttctgtgcaagcggcc
ctgttcgtagcaattattattgttgcacatatatcagcaaagaccacccagtttccaaaa
taccagtacacgaagaagccctttcaagaggtccatcagaccacaactaccttctccagt
gcaatgacggaggagacaacagacggcactgaaacctcttcatcggctgtcactgacagc
accacattccccgacaccgtgcaacatgccttcaggaccataacgacaccagcccccagt
ggggaacatgaaaacttcaccctcgattataatgaatgcttcttcaatttctgcgagtgc
tgccccccagaacaagggccaaaaggacagaaaggtgacagagggcttccaggtcccaga
ggagaaagaggggagcagggactaagaggattgctaggggcagcaggacctgctgggtta
aatgggctacagggagagaaaggagacaaaggtgaccaaggggaaaacggaatgaatgga
atcccaggcattccaggaaagcaaggcgctaaaggtgattctggatcaaaaggagagaag
ggaaatcttggttttgctgggcctccaggtgacagaggagaaaaaggggatccttgtgag
aatggcacgaaaggagagagaggtgaagtggggcctccgggtgtgcaggggttaagtgga
gagaagggggatacaggagggaaaggggaaatgggggataaaggggaacctggggcagta
ggggaaaaagggggcaaaggagagaagggagaagaggctgtgaaaggtgaaaagggagat
aatggggaacctggcatcagtggtgccaatggtgccaatgggttggaaggagcaaaagga
gaccctggaccaagtggagataaaggcaaccctggcacagcaggcttacctggaccagca
gggttaaggggcaacaatggaccaaaaggtgacaggggacatccagggatgaaaggggac
cgtgggccaagaggatttaaaggagccaggggtaacagcctggtactcaaacgatctagc
ttcagcgttggcctgtcacccagtaaatcgttccctccatctggtttccctgtcaaattt
gataagatcttctacaatggggaaaaccattatgacgcaagcatcggtaaattcaactgc
agcatcgcgggagtgtatgtattcacctaccacgtgactgtaagaaacaggccccttcgg
ctggtgctggtcgtcgatggctccagaaagctcagaagcagggattctttgtatggacag
gatattgaccaagcctctaactttatcctcttgaagttaaatcagggtgaccaagtgtgg
ctggaaaccctgcgagactggaatggggtgtatgctagcagtgacgatgacagcaccttt
tcaggatttttattgtattcagatgaggtttga
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