Polyodon spathula (Mississippi paddlefish): 121327370
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Entry
121327370 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121327370
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121327370
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121327370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121327370
NCBI-ProteinID:
XP_041127285
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All DBs
Position
14:2094607..2099382
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AA seq
244 aa
AA seq
DB search
MGTHCSGPSTRSDLIKDPTGAQSLTTLSMVLPRDVCCYLPVNYKESHAHSRLCFHNDSHC
PVCLQTATFPVETNCGHLFCAPCLIEYWRHGSWLGAISCPLCRQQVSILCNLFHENQRDQ
QQRQVLLDIRDYNKRFSGEPRPVADYLYDMPLFLSLALRGLFTMGGVVWIFCLRIAVCCC
GAVVSLSSLLGVFPEPLCGVLGAVDHLMVVFLLLICMININQQMGPERANIANSTTQGVL
SDSL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggtactcactgctcaggtcctagcacaagatctgacctaattaaagaccccacagga
gcacaaagtctaaccaccctgagcatggtccttccgagagacgtctgctgttatttgcct
gttaattacaaagaatcacacgcacacagcaggctgtgtttccacaatgactcccactgc
cccgtgtgcctccagacagccaccttccctgtggaaacgaactgcggacacctcttctgt
gctccctgtttaattgaatactggaggcatggctcgtggcttggagcgatcagctgccct
ctctgcagacaacaagtgagtattctgtgcaacctctttcatgaaaaccagagagatcaa
cagcagagacaggtcttgctagacatcagggattacaataaacgcttctctggagagccc
cgccccgttgcggattacctctacgacatgcccctgttcctcagcctcgccctgaggggg
ctgttcaccatgggtggggtggtgtggatcttctgcctgaggattgctgtgtgctgctgc
ggggccgtcgtgtcactctcctccctgctcggcgtctttccagagccgctgtgcggggtc
ctgggggccgtggatcatctgatggtggtgttcctcctgctcatctgcatgatcaatatc
aaccagcagatggggccagagagagccaacattgccaacagcaccacgcaaggagtgctg
tcagactcgctgtag
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