Polyodon spathula (Mississippi paddlefish): 121327393
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Entry
121327393 CDS
T07273
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04382
Cornified envelope formation
pspa04514
Cell adhesion molecules
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121327393
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121327393
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121327393
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121327393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121327393
04147 Exosome [BR:
pspa04147
]
121327393
04515 Cell adhesion molecules [BR:
pspa04515
]
121327393
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121327393
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121327393
Exosomal proteins of colorectal cancer cells
121327393
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
L1 family
121327393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF3185
DUF1218
Motif
Other DBs
NCBI-GeneID:
121327393
NCBI-ProteinID:
XP_041127348
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All DBs
Position
14:37942735..37946153
Genome browser
AA seq
212 aa
AA seq
DB search
MANSGLQLLGFVLAFVGFVGLIASTSMPEWKASSYAGDNIVTALAIYEGLWMSCASQSTG
QVQCKWFDSLLQLSAIVQTTRALMILGIFLGFFAILIASLGMKCTTCFADDKQKKSRIAT
IGGAVFITAGLSALVATSWYGQRIAQDFYNPFTPTNTKFEFGMALFIGWGAATLCILGGA
FLCSSLCSKGRQAGSQQYPKTKAMPPGGKDYV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgggactgcagttgcttgggtttgtcctggctttcgttggctttgtcggt
ctgattgcatccacgtcgatgccggaatggaaggcatcatcgtatgccggggacaatatc
gtgacagccttggcgatatacgaggggctgtggatgtcgtgcgcgtcacagagtactgga
caggtacagtgcaagtggtttgactcgctactgcaactgagcgccattgtccagaccacg
cgggctctgatgatcctgggcatcttcctggggttctttgccattctcattgcgtcgctg
ggtatgaagtgcaccacctgcttcgccgacgacaagcagaaaaaatcacgcattgccacg
attgggggagctgtcttcatcacggcaggtctctcggctctggtggctacatcttggtat
ggtcaaagaattgcacaggatttctacaacccatttactccaaccaacacaaaattcgag
tttggcatggctctctttattggctggggggctgcaacactctgtatcctggggggggcc
ttcctctgcagctccttgtgttcgaaggggaggcaggcaggctctcagcagtaccccaag
actaaagccatgcccccaggaggaaaggattacgtgtag
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