Polyodon spathula (Mississippi paddlefish): 121327420
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Entry
121327420 CDS
T07273
Name
(RefSeq) vesicle-trafficking protein SEC22b isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121327420
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121327420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121327420
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121327420
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
121327420
NCBI-ProteinID:
XP_041127413
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Position
14:complement(106524..122629)
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AA seq
219 aa
AA seq
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MVLLTMIARVADGLPLAASMQEDEQGGEQSGRDLQQYQSQAKQLFRKLNEQSPPRCTLEA
GAMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQSEFDEQHGKRVPTVSRPYSFIEFD
TYIQKTKKSYIDSRARRNLGNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSL
SKKYRSDAKYLNTRSTYAKLAAVGVFLVMLIVYVRFWWL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctgacgatgattgcccgggtcgcggatggactcccgctcgccgcctccatg
caggaggacgaacagggaggagagcagtctggacgggacctgcagcagtatcaaagccag
gccaagcagctcttcaggaagctgaatgaacagtcgcccccgcgatgcacgctggaggca
ggggccatgtctttccactacgtcatcgagaagggggtgtgctacctggtcctgtgtgag
gcggggttccccaagaagctggcgtttgcctacttggaagatttacaatcggagttcgat
gagcagcatgggaagagagtgcccacagtatccagaccgtactcctttattgagttcgac
acatacattcagaaaaccaagaagtcgtacattgacagcagagcccgacgcaacctgggg
aacatcaacacagagctgcaggatgtgcagagaatcatggtggccaacattgaggaggtg
ctgcagagaggagaggcgctgtcagctttggactccaaggccagcaacctgtccagcctg
tcgaagaaataccggagtgacgctaagtacctgaacacgcgctccacgtacgccaagctg
gctgccgtgggggtgttcctcgtcatgctcatcgtctacgtgaggttctggtggctctga
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