Polyodon spathula (Mississippi paddlefish): 121327425
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Entry
121327425 CDS
T07273
Name
(RefSeq) volume-regulated anion channel subunit LRRC8B-like isoform X1
KO
K22038
volume-regulated anion channel
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121327425
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121327425
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121327425
NCBI-ProteinID:
XP_041127419
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Position
14:4599350..4602339
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AA seq
787 aa
AA seq
DB search
MLSGSELKHFVSGRSLYHVLQPWWDVFSHHLSIMMLMVAAVGGTLQIAQCKILCVPCQLS
SDHGCTPPLDLGTANHSSASYTSTGIPLLTGIINDLDLQQYSYIDAVCYEKQLHWFAKFF
PYLVLSQTLIFILVSNFWFKYPSTSSRLVHFVSILRKCCDSPWTTRALSETVAEQNSQRS
TLSKYSVLKSSSSMDGDVRPNNLVGIDPIGILDKKEGEQAKAIFEKVKKFKMHVEEKDII
YRLYMNQILAKLMLFFIIMAYIPYVTTCISFDLDCVVDIQAFTGYQRYHCVHSLATIFKM
LASFYVVLVIMYGLMCFYSFWWMLRRSLKQYSFESVREGSSYSDIPDLKNDFAFILHLLD
QYDPLFSKRFSVFLSEVSENKLKQINLNDTWTAEKLKQKLSRNIQDKVELQLLLLSGIPD
AVFELKELEVLKLELIPDARFLLKVTQLVNLKEIWLNHTIATVDFPALSFLSENIKILRL
RCTDMDRAPQWMFSLINLRELYLDLPPESNAQFINGLAKLKNLKVLFLKNSIPCIPQVIP
CSLSSLQNLSVNNEGTRLTELNNLKMMINLTCLKLVNCDLERIPHSVFSLTDLWEIDLEG
NNLKTVEEIISFQHLQRLCTIKLWHNNIAYIPMHIGALESLEQLYLSHNNIDTIPLQLFL
CSKLSLLDLSHNSLTFIPDEIHYLKKLQYFAVTNNNIDELPDGLFQCRMLQSLLLGNNSL
SVLPPLVSELVNLVELELSGNQLETLPVELGGCLNLRASGLIVEDCLFRSLPSAMKENWL
QSEKEQL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaggaagcgagctcaaacactttgtcagtggtcggtcattgtaccatgttcta
caaccatggtgggatgtcttcagccaccacctctccattatgatgcttatggtcgctgct
gttggcggaactctgcaaattgcccagtgcaagattctttgtgttccttgtcagctgtct
tcagatcatggttgtacacctcctttagatttgggcacagcaaatcatagctcagcaagc
tacaccagtactggtatcccactcctaactggaattataaacgatctggatttgcagcag
tattcgtacattgatgctgtgtgctatgagaaacaactccattggtttgctaagttcttc
ccctatctggtcctctcccagacgttgatcttcatactggttagcaatttttggtttaag
taccccagtacaagttcaagacttgtgcactttgtttccattttacgtaaatgttgtgac
tctccttggaccactcgtgctttgtccgaaacggttgctgaacaaaacagtcagcggtcc
actctgagcaaatatagtgttttaaagtcatcatcttcaatggatggtgatgttagaccc
aataatttagtgggaattgacccaattggtattttggacaaaaaagagggtgaacaagct
aaagcaatttttgaaaaagttaaaaagtttaaaatgcatgttgaagaaaaagacattata
tatcgattatatatgaatcagatactggctaaactgatgttgttcttcatcattatggct
tatatcccttatgttactacttgtatatcatttgatttagattgcgtggttgacatacaa
gcatttacagggtatcagagatatcactgtgtccattctttggcgaccattttcaaaatg
cttgcatcattctatgtggtgttagttataatgtatgggcttatgtgtttttatagtttt
tggtggatgctcagacgttctcttaaacaatactcgtttgagtctgttcgagaaggaagc
agctacagtgacatcccggatcttaagaatgattttgcttttatccttcacttgttagac
caatacgaccctcttttctctaaacgcttttctgtctttttatcagaggtcagtgaaaac
aaacttaaacagattaatctgaacgatacatggactgctgaaaagttgaagcaaaagctg
tcacgtaatatacaagacaaagtagaactgcaactattactactcagtgggattccagat
gctgtatttgagttaaaagaacttgaagtcctaaagctcgagctcattcctgatgccagg
ttcctactaaaagtaacgcagcttgtcaatctgaaagaaatatggcttaaccatacgata
gctactgtggatttcccagcactaagtttcctgtctgaaaacattaaaatattaaggtta
agatgtacagatatggatagagctccacagtggatgtttagtttaataaacctcagggaa
ctttacttggacctgcctccagaaagtaatgctcaattcattaacggacttgcaaagctt
aaaaatctgaaagttctgttcttaaagaacagtataccatgcattccacaggtgatacct
tgctcattgtcttccctgcagaatttatctgtaaacaatgaaggcacaagattaacagag
ttaaataacctcaaaatgatgataaacctcacatgccttaagcttgtcaactgtgatcta
gagcgaatcccacactcagttttcagtcttactgatctgtgggaaattgatctggaagga
aacaatcttaaaacagttgaagaaattattagttttcagcaccttcagagactttgcact
atcaaactgtggcacaacaacattgcatatatccctatgcatattggggctttggaaagt
cttgagcaactttacctgagccataacaacattgataccattcctctacagcttttcctg
tgcagcaaactatcccttctagaccttagtcacaacagcttaacttttattccagatgaa
atacactatcttaagaagttacagtactttgccgtcaccaacaataatattgatgagctg
ccagatggattatttcagtgcagaatgctccagtctttgcttctgggaaataacagtcta
tcagtattacctcccctggttagtgaactagtgaacctagtagagctggagctcagtgga
aaccaactggagacactacctgtggagctggggggctgtttgaaccttagagctagtggt
ctgattgtagaagattgtctattccgttcccttccatctgcaatgaaagaaaactggcta
caatctgagaaagagcaactgtga
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