Polyodon spathula (Mississippi paddlefish): 121327461
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Entry
121327461 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121327461
04082 Neuroactive ligand signaling
121327461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121327461
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121327461
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
121327461
NCBI-ProteinID:
XP_041127446
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Position
15:complement(3737617..3766105)
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AA seq
462 aa
AA seq
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MDNGILCFATMKLHLAFLVLTSITCCLSVSQMAAGTLKEDPNNNITIFTRILDGLLDGYD
NRLRPGLGERITEVKTNIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLKFKGPMQRLPLN
NLLASKIWTPDTFFLNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFP
MDAHACPLKFGSYAYPDSEVVYIWTSGAARSVVVAEDGSRLNQYHLIGQTVGREVIRTST
GQYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT
TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAFEAHQ
PKKKPPMALTKKANNVCMAVGVNNTANIMKESVLSTISNSTSVQMKPAEAKPPEAEKTYN
SISRIDNMSRIVFPVLFGTFNLVYWATYLNREPVIKGALTPK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggaatactctgctttgctacaatgaaactccacttggccttcttagttctc
accagcataacctgctgccttagtgtatcacagatggcagcgggaacactgaaggaagac
cccaataacaatattaccatattcacaaggattttagatggattgctggatgggtatgat
aacaggctgcgtcctggactgggagaaagaataacagaggtaaaaacaaatatctacgtc
acaagctttggcccagtctcagatactgaaatggaatatacgattgatgtgtttttccgc
caaagctggaaggacgaacgacttaaatttaaaggaccgatgcaacgacttcccttgaat
aaccttctagccagcaaaatctggacaccagacaccttctttctcaatggcaagaaatcc
attgctcacaacatgaccactccaaacaagctgctgcgcttggaagatgatgggactctg
ctctacaccatgaggttgaccatttctgctgaatgtcctatgcaactggaagactttccc
atggatgctcatgcatgccctcttaaatttggaagctatgcctatccagactctgaagtt
gtttatatctggacctctggtgccgcccgttctgttgttgtggctgaagacggttcgagg
ttgaaccagtatcatctaataggacagacagtggggagggaggtcatcagaacaagcaca
ggacaatatactgtaatgacggcacatttccatctgaagagaaaaatcgggtactttgta
atccagacctacctcccgtgcattatgacggttatcctgtctcaggtgtcgttctggtta
aacagagagtcagtgcctgcaaggactgtgtttggtgtcaccacagtgctgacaatgaca
acgttaagcatcagtgctcgcaactctttgcccaaagtggcatatgcgacagcaatggac
tggtttatagcagtgtgctatgcatttgtcttctccgcgctaatagaatttgccactgta
aattatttcaccaaacgaagctgggcatgggatgggaaaaaagcattcgaagcccatcaa
cccaagaaaaagcctcccatggcactaacaaagaaagcgaacaacgtctgcatggctgtg
ggagtgaacaacacagcgaacatcatgaaggaatcggtcctttccaccatttccaacagc
acctcagtgcagatgaaacctgcagaagcaaagcctccagaggctgaaaagacttacaac
agcatcagcaggatcgataacatgtccaggatcgtgttcccggtgctttttgggactttc
aacctagtctactgggccacgtatctgaacagggagccagtaataaagggagccttaact
cctaaatga
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