Polyodon spathula (Mississippi paddlefish): 121327512
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Entry
121327512 CDS
T07273
Name
(RefSeq) dystrophin-like
KO
K10366
dystrophin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121327512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121327512
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121327512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
121327512
NCBI-ProteinID:
XP_041127516
LinkDB
All DBs
Position
15:complement(12167560..12486706)
Genome browser
AA seq
2170 aa
AA seq
DB search
MAEAGRPEDHREDSVGDEFNEIIKTRSDEREDVQKKTFSKWINSQFAKAGKSQIEDLFTD
LRDGRRLLELLESLAGHELAKEKGFTRVHALNNVNRALQVLQKNNVELVNIGGADIVDGN
HKLTLGLIWSIILHWQVKDVMKNIMAGLQQTNSEKILLSWVRQSTQYYQEVNVVNFTNSW
SDGLAFNALIHSHRPDLFEWSSVLKYQSATEKLDHAFSTAKQHLGIEKLLDPEDIATTHP
DKKSIIMYVTSLFQVLPQQVTIEAIREVETLPRNTKLTQEEHFQIQHQQRYSQQITVSVA
QGSVRTPSPSLKPRYKSYAYTQAAYVMSSDQERKCFSPQPQTQEGRVVGSPLMEAEVHLD
SYQSALEEVLTWLLSAEDALHTHGDVSSDVEEVKEQFHTHEGFMMELTSHQGSVGKVLRA
GSKLLSEGKLSEDEENEIREQMNLLNSRWENLRVASMERQSKLHEVLMFLQYQQLKQLEG
WLVTTEARISRMETQPLGPDLEDVKHQVEEHKLLQEDLEAEQVRVNSLTHMVVVVDESSG
DSATAALEEKLQSLGERWAAICKWTEERWILLQEILLKWQHFTEEQCLFDAWLIEKEEAV
NRIQTTDFKDQNEMVTSLRQLAILKGDLEMKRQTMDKLCALSQDLLSAVKNKDVAQKLEA
RLEDFAQRWDSLVQALEKSSTQISQTVTTAQPSLTQTTVMETVTMVTTREQVLVKHVKEE
LPPPPSQKKRQIVVDSELRKRFGVDTTELHSWMTRSEAVLQSPEFAISRKEGNLSDLQER
VNAIEREKPEKHRKLQDASRSAQALVEQMVNEGLNADDIKQASEQLTSRWSEFCQLLGER
LAWLQYQNKILAFYSQLQQIEQAVVTAENWLRSQQALATDPEPIKLQLEKCKDEVARLSA
LQLKVEKLKDQGKELKEKEEVPMFLDADITALTNHYNQVLADLQAREKQLNTILESLPPT
RYKETVTTLLLWIQQSETRLSIPQVTVTEYEVMEQRLKELKVLQGSLQEQQSGLNYLTST
MEEVCQKAPVEISKKYRLEIENILCRWKKLSAQLGEQGQKLEELMTKLQQFHNDIKTLQK
WMAEVDVFLNEEWPALGDSEALEKQLEQCTALVNDIHTIQPSLNGINKVGQALKSEAEPA
FASKLQEELTELNAQWENICKQAFAKKSALKGGLDKTVSLRKDLTEMQEWITQAEEDYLE
RDFEYKTPEQLKRAVEELKRAREEVQQKEVKVKLLTDSVNSFIAKAPPVAHEALRTELGV
LTSNYQRLCSRLNGKCKTLEEVWACWCELLSYLEAENRWLDELELKLRATDNIQGGAEEI
SEALDSLESRLRHPEDNRNQVRELAQTLTDGGILDELINVKLETFNTRWDELLQQAVRRQ
QSLEHSIQSAQETDKTVRLIQESLATIDRHLTAYITDQIDAAQIPTEAQKIQSELSSHES
SLDEMKKRKLAKETSERVISQIDVTQKKLQEVSMKLRLFQKPVNFEQRLLDCKRTLDDVK
TQLPLLEMKSVEQDVLQSQLDQCMKLYKNLSEVKLEVETVIKTGRQIVQKQQTENPKELD
ERLTALKVQYNEMGAQVTEGKQDLEKCLKLSRKLRKEVNALTEWLAATDTELTKRSAVEG
VPTNLDAEVAWGKAVQKETEKHHQQLKNISDLAEAVKAILHGKENLVEDKVSLLNCNWIA
VTSRAEEWLNVLLDYQKQMGIFDQNIAQITAWMYRAEILLDESEKQDDREEVLKCLKAEL
SDIGTKVEVVRDQAQDLIKNRGDHCREVIEPTLTELNQRFEALSHRIKTGKASVSYREVE
QYHADAQKWLEQLEAEVKQGENLKEEDFQKAAGDSEEGAVKELLQKGENLQQRVPDEKKR
EEIRIKQHLLNSKYNTVKDLRSLRKKKALPISPQWYQYRRQADNLLQWLDDIEKRVASLP
DPKDEQKTKEIDAELEEKREDLNAVNRQAQSLSRDGAAKAVEPSLIQLNKRWQEIESKFA
QFRRLNFSQIQTVFEETTVVTTERVTEETSHISSEYLAEIRWLLHSIAEVEFLLNSPEYW
AGNFHNFSNQEDCLKNVKYNLGQLSSRVEGVHSKKAAGLQSASPVETEQIQEALSQLDVN
WEKLNKLYKDRHARFDKSVEKWHRFHSYLKSLVQWLTEAECVLAKMKTDSGCLDQTKAKE
QFKSIGHLDV
NT seq
6513 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcaggacgtcccgaagatcacagagaggactcggttggggatgaattcaat
gaaatcatcaaaaccagatcggatgaaagagaagatgttcaaaagaaaaccttctcaaaa
tggataaactcacagtttgctaaggctgggaaatctcagatcgaggacctcttcactgat
cttcgggatgggagacggcttctggagctcttggaaagcctagcaggccatgaactagca
aaagaaaagggcttcacaagagttcatgcactcaataatgtcaaccgagcattgcaagtc
ctgcagaaaaataacgttgagctggtaaacattggaggtgctgacatagtggatggaaat
cataaacttaccttgggtttgatctggagcattatcctccactggcaggtaaaggatgta
atgaaaaacatcatggctggtttgcaacagacaaacagcgagaagatcctgctaagctgg
gtgcgccagtcaacccagtactaccaggaagtcaatgttgtcaatttcaccaacagctgg
tctgatggcctggccttcaatgcacttatccatagtcacaggcctgatctctttgagtgg
agcagcgtactgaagtatcagtcagctactgaaaaactggaccatgcattcagcacagcc
aaacaacacctaggcatcgagaaactgctggatcctgaagacattgcaaccacacaccca
gacaaaaagtccatcattatgtacgtcacatcgctctttcaagtcctgccccagcaagta
accattgaagccatccgagaagtagagactctaccccggaacacgaagctcactcaggag
gaacattttcagatccagcatcagcaacgatattctcagcagatcacagtcagtgttgca
cagggcagtgtgcgcaccccctctccttctcttaaaccacgctacaaaagctatgcctac
acacaagctgcttatgtcatgtcatctgaccaagagaggaagtgtttttctccccagcct
caaacccaggaaggcagggttgttggcagcccgctgatggaagctgaagttcacctggac
agctaccagagtgcattggaagaggtgctaacatggctgctgtcagctgaggatgctttg
cacacacatggagatgtctctagcgatgtggaagaggtcaaggagcagtttcacacccat
gagggcttcatgatggaattaacatctcaccagggcagtgtgggaaaggtcctccgcgct
ggaagcaagttgctatcagaagggaagctgtcagaagatgaagaaaatgagatccgagaa
cagatgaatctcctgaactccagatgggaaaatctcagggtagccagcatggagaggcaa
agcaaactacatgaagttctaatgttcctgcaatatcagcaactgaaacagctggaaggt
tggcttgtgacaacagaagcaagaatcagcagaatggagacacagcctcttggtcctgat
ctagaagatgtaaaacaccaagtagaagaacacaaactgctccaagaggacctggaggca
gagcaagtgagagtgaactccctaacccacatggtagtggtggtagatgagagcagtgga
gacagtgccacagctgccttggaggagaaactgcagagcttgggagaaaggtgggcagcc
atttgcaagtggacagaggagcgctggatccttttgcaggagattcttctcaagtggcag
cacttcactgaggagcagtgcctttttgatgcctggctgattgaaaaagaagaagctgtt
aacaggatccaaacaaccgatttcaaagaccagaatgaaatggtgaccagcctgagacag
ttagctatcctgaaaggggacttggaaatgaagagacagaccatggataagttgtgcgca
ctcagccaggacctcctgtcagccgtgaaaaacaaggacgtagctcaaaagctggaagct
cgtctagaagattttgcccagcgctgggacagccttgtgcaggccctggagaagagctcc
acgcagatttcacagactgtcaccacagctcagccatcactaacgcagaccacagtaatg
gaaactgtaactatggtgaccactagagagcaggtcctggttaaacatgttaaggaagag
ctccctccacccccgtcccagaagaagaggcagattgtggtggactctgaacttcggaaa
aggtttggtgtggatacgaccgagctgcacagttggatgaccagatctgaagccgtactc
caaagtccagagtttgcgatttcccgaaaagaagggaacctctcagatcttcaggagcga
gtaaatgctattgagagagagaagccagagaagcacagaaagctgcaagatgccagtcga
tcagctcaggcactggtggaacagatggtgaacgagggccttaatgctgatgacatcaag
caggcctcggagcagttgaccagccgctggagtgagttctgtcagctgcttggagagaga
ctggcttggctgcagtatcagaacaagattttagccttttacagccagcttcagcagatt
gagcaggctgtagtgactgcggagaactggctgaggagccaacaagcactagcaacagac
cctgaacccatcaaactacagctcgagaaatgcaaggatgaggtcgctcgcttgtctgca
ctgcagcttaaagttgagaagttgaaagaccaagggaaagagctcaaggaaaaggaagaa
gtgcccatgtttcttgatgctgatatcacagcgctcaccaatcactataaccaggttttg
gctgaccttcaggcaagggaaaaacagctaaatactattctagagagcctgccacctacc
cggtataaggagactgtgactaccctcttgttgtggatccagcaatcagaaaccagactc
tccattcctcaggttacagtcactgagtacgaagtcatggagcagagacttaaggagttg
aaggtcttacagggctcccttcaggaacagcagagtggcctcaactacctaacatccacc
atggaggaggtgtgtcagaaagcccctgtggagatcagcaagaagtacaggctggagatc
gagaacatcctctgtcgctggaagaagctgtcagctcaactgggagaacagggccagaaa
ctggaggagctgatgaccaaactccagcagtttcataacgacataaaaactctgcagaaa
tggatggcagaagtggatgttttcctaaatgaagaatggcctgcgctgggagattcagaa
gctcttgaaaaacaattggagcaatgcacagctttggtgaatgacatccacacgatccag
cccagtctgaatggtatcaacaaagtgggtcaggctctcaaaagcgaggcggagcctgcc
tttgccagcaagctgcaggaagagctcactgaactcaatgctcagtgggagaatatctgc
aaacaggcttttgctaaaaagtcagccttaaagggtggattagacaagacggtgagtctg
aggaaggacctgactgaaatgcaggagtggataacacaagcagaagaagattacctggag
agggattttgagtacaaaacaccagagcagttgaaaagggcagtggaggagttaaagagg
gctcgagaggaggtccagcagaaggaggtgaaggtaaagctcctcacagattcggtgaac
agtttcatagcgaaggctcctcccgtcgctcacgaggccttaaggactgagcttggcgtt
ctgacatccaactaccagagactgtgcagcagactgaatgggaaatgcaaaacgttagag
gaggtctgggcctgctggtgtgaactcctgtcatatctcgaggcagagaacagatggctg
gacgagttggaacttaaactgagagctacagacaacatccaggggggtgcagaggaaatc
tcagaggcattggattctctggaaagcaggttgcgccacccagaggacaaccgtaatcag
gttcgagagcttgcccagacactgacagatggaggaatcctagatgagctgattaatgtg
aagctagagacctttaatactcgctgggatgagcttctgcagcaggctgtaaggagacaa
cagtcccttgagcatagtatccaatctgctcaggaaactgacaaaacagtgcgcttaatc
caggagtctctagcaaccattgaccgccacctaacagcctacattacagatcagattgac
gcagctcagatcccaacggaagcacagaaaatccagtctgagttgagcagccatgaaagc
agcctggacgaaatgaaaaagagaaagcttgcaaaggaaacttctgagcgagtcatttca
cagattgacgtaacacagaaaaagctacaggaagtctccatgaagttgcgcttgttccag
aagccagtgaactttgagcaacgcctgttggattgtaagaggactctggatgatgtgaag
acccagttgccattgttggagatgaaaagtgtggagcaggatgttctgcagtcacagctg
gatcaatgcatgaaattgtacaaaaatttgagtgaggtgaagttggaagttgagacagtc
ataaagactggacgccagattgttcagaagcagcagactgaaaaccccaaagagctggat
gagagactcacagctttgaaagtgcagtacaatgaaatgggtgcccaggtgacggaaggg
aagcaagacctggagaagtgtttgaaattgtcccggaagctgaggaaagaggtgaatgct
ctgaccgaatggctggcggcgacggatacagagctgacaaagcggtctgcagtggagggg
gtgcccactaatttggacgctgaggttgcatggggaaaggctgtacagaaagagactgag
aagcaccatcagcagctgaagaatatctctgatctggctgaagctgtgaaggctatactt
catggcaaggagaacctcgtagaagacaaagtcagcctcctgaactgtaattggatagca
gtgacctcaagggctgaggagtggctaaacgtgttgttggattatcagaagcagatggga
atttttgatcagaacattgcccaaatcaccgcctggatgtaccgcgctgagatactcttg
gacgagtcagaaaagcaggacgatagagaggaagtgttaaagtgtttgaaggctgagttg
agcgatattggtacgaaggtggaggtagtgcgtgaccaggcgcaggacctcattaagaac
cgtggcgatcactgcagagaagtcatagagcccacgctgacagagcttaatcagcggttc
gaggctttatcacacaggataaagactgggaaggcctctgtttcctacagagaagtggag
caatatcacgcagatgcacagaaatggctagaacagctggaggcagaggttaagcaagga
gagaacctgaaagaagaggattttcagaaagctgcgggagattcagaggaaggggcagtg
aaagagcttttgcagaaaggagagaacctacagcagcgagttccagatgagaagaaacga
gaggagatcagaataaaacaacacctgctaaattctaaatataacactgtcaaggacctg
agatctctgaggaagaaaaaggctctgccaatatcaccccagtggtaccagtacaggcgg
caggctgacaacctactgcagtggcttgatgacattgagaaaagggtagccagtctacca
gaccccaaagatgaacaaaagacaaaggagattgatgctgaactggaggagaagagagaa
gacctgaatgcagtcaacaggcaggctcaaagcttgtcaagggatggggctgcaaaggca
gtggagccgagcttgatccagctcaacaaacgctggcaagaaatagagagcaaatttgct
cagttccgacgactgaacttttcacaaattcaaacggttttcgaagagacgactgttgtg
acgactgaaagggtgactgaggagacctctcatatatcatctgagtacctagcagagata
cgctggctgctccactccatagctgaggtggaatttctcctcaactctcctgagtactgg
gctggaaacttccacaacttctcaaatcaagaagactgtctgaagaatgtgaaatacaac
ctggggcagctgtccagtcgggtggagggtgtccacagtaagaaagcagcaggccttcag
agtgcctcacccgtggaaaccgagcagatccaagaggccctgagtcagctggatgtaaac
tgggaaaaacttaacaagttgtacaaggaccgtcatgcgaggtttgacaaatctgtggag
aagtggcatcgattccacagctatttaaaaagccttgtccagtggctgactgaagctgaa
tgtgttctggctaagatgaagactgactctgggtgccttgaccaaaccaaagccaaagaa
caatttaagtctattggccacttggatgtttga
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integrated database retrieval system
