KEGG   Polyodon spathula (Mississippi paddlefish): 121327536
Entry
121327536         CDS       T07273                                 
Name
(RefSeq) protein Shroom2-like isoform X1
  KO
K18625  protein Shroom
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pspa04812]
    121327536
Cytoskeleton proteins [BR:pspa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     121327536
SSDB
Motif
Pfam: ASD2 ASD1 PDZ PDZ_6 ASCC3_N PDZ_2
Other DBs
NCBI-GeneID: 121327536
NCBI-ProteinID: XP_041127542
LinkDB
Position
15:15043716..15120762
AA seq 1790 aa
MDIVDDKRTDQRFTDKNQRLVRGIVDQQGVEILSVMEQRAADTEGTSLVEVVLTGGAPWG
FTLKGGLEHREPLVITKIEEGSKAAAAGKLQAGDEIVSINEFLTGYRQEAICLVKGSHKS
LTLVVKRRNEPVIRPHSWHSTKFTESQSEAAPAVWPTRYDTSSASHDLSNSWDQTNLQRF
SDQFSSLGSMDSLDHSSNSCQHGRLSPAKSNNSIDNLVGGSGGGSSSKRDSAYSSFSTSS
STPDYTLSKSNAASTENMLYKVGQCDSGRYGNGRHSQSLNENSRLDDRQGYLQLPARNGG
RESPRTEEQPGSRHSSSGKSSFGPVWHVPEKKSAPSPPPPLPPVRSDSFAATKVHEKGLL
PPYSERSDPQNFKKPQPRVAGGPPVEPADYQQKLIRVNERGPGARRSCNPPPKNDSSSYL
SMDSYNNNQLSANRLQSLSSTDVRIGQPPHVYVAHHQRQYSDESTLYTHTRSTAVPKQQS
VGNYYNSMQELPTDNFNQYYNQAQVRTSSASLANPPTEQNMESAGHNRYYCVTARQPAQS
VSQASLVKVENWKGCTGTESAQGLSERNSPAPTKVQKPKYPLPHPEVQENSGYYWLEDSH
DRSPATVEEMPSVKPIGDERGSQKSNNGYHLESHYIGFTHNTQDNLKNCGVVQQRSQQKE
PQWPEDEGKICPQKTPMLHSLAQESKHLASKQVAPPNSYRQDALDPLATKQQRRSDRYAT
TLRNEIQMRRAKLQKSKSAATLTDPDEVEEEAESWKEESAEHSTSSSDGSFSNTYKDHLK
EAQARVLGATSFRRRDLEPVLLEHPASPSDTLPCYPTMTSSHPHKDVNPQPGFPEAPQSK
PIPAAAGGASHKSRIGGRKRFTAEQKVRSYSEPDKMHEVGVSKTHHHSNNADKFITFADR
RKFFESTSKPAFLKPANRPNQQGSVDEQSEVRSSRRLHPNETEESWYERRVRATSFGYES
SLGALHEDKDNYRDISKKYSDRYMMLEQQRLGTFAEYEATWNEQKKPSEAKTSGMYHSAD
NILDSGFEEHSKPQYVHERSRSSPSADFYGKSVVVQAKKKAENSQKDQKLPGAKNTDCDI
SVASLSPGCTVSLQPAYSTEQTCWLSVPDRLSDGGHKECKLDEKLLVNDESTEDKHRSAS
RQTPPEQLLRPPAESRERAVTLPSDYGYIIQEGETEIKNRDFNNAVPTYLESHTLNDNRI
RSQSIGLDNQSTTITAAPFSKKKGPVPQRPPPPKLDKYKRQDIQSSLIDSSESLLSSQRA
VGLCSPSIEGPLSAIPAPALNTASTAAEPARAASQSGETQHRKVLENEHRTVEKPDVVHQ
TTTSSKYPCLLKPSMDVPRSPSPQFAPQRLTDKPPVSIKNEAPSRIEKVMENNTTVKMVP
IKILHSESHSEKESRQYLLHNLEPISVPDEQEKDQIKTLGTKQQSYSLFCAYTRQKEEQM
KEEQNRTCDVAQNELLWAEIKDSISLSPANSAVKANDRAVDDLKTEELAREIVGKDRSLA
DILDPNIKMKTTMDLMEGIFPKDEQLLEDAQQRRRILPKQNSPKPAEEKKNEENAASLAT
SSSYYNTSAPKAELLIKMKDMQEQIVEEEEDLEDELDHDLSEKKQELIDSISRKLQVLRE
ARESLHEDIQANIALGEEVEEIVKQVCKTNEFDKFRMFIGDLDKVVSLLLSLSGRLARVE
NALNNLDETASTEEKRTLTDKRKLLIRQHEDAKELKENLDRRERVVFDIVASYLNEENLA
DYEHFVKMKSALIIEQRKLEDKIKLGEEQLKGLTDSLPPESRQPEHRITF
NT seq 5373 nt   +upstreamnt  +downstreamnt
atggacattgttgatgacaagaggactgaccagaggtttactgacaagaatcagagactg
gtgcggggaattgtagaccagcagggagtagaaatactcagcgttatggagcagagagct
gctgataccgaaggaaccagcctggtggaggtagtgctgacaggcggggcgccctgggga
ttcactctcaaagggggtctggagcacagagagccgctcgtcataactaagatcgaggaa
ggcagtaaagctgcagcagcagggaagctccaggccggggatgagattgtcagcatcaac
gagttcctgaccggatacagacaagaggccatttgtctggtgaagggctcccacaagtcg
ctgacgctggtggtcaaaaggagaaatgaacctgtgatccggcctcactcctggcactcc
accaagttcacagagagccagtctgaagctgcccctgctgtctggcccaccagatacgac
acaagttcggcttcacatgacctgtctaactcatgggatcagacgaacctgcagcgattt
tccgatcagttcagctccctgggcagcatggacagcctagaccattcctccaacagctgc
cagcatggacgactctctcctgccaagtccaacaacagcatcgacaacctggtaggaggc
agcggtggaggcagcagcagcaagcgggattcggcttatagctctttctctaccagctcc
agtaccccagactacactttgtcaaagagcaacgcagcctccactgagaacatgctgtat
aaagtgggccaatgtgactctgggagatatggaaacgggaggcacagccagagcctgaat
gagaacagcagattggatgacaggcagggatatctgcagctgccggctaggaatgggggc
agagaaagcccaaggacagaagagcagcctggatcacggcactccagctcagggaagtcc
agctttggcccggtgtggcacgtccctgaaaagaagagtgccccctccccgccacctccc
ctccctccggtccgcagcgatagctttgcagctaccaaagttcacgaaaaaggtctcctt
ccgccttactctgagagatctgacccccagaactttaaaaaacctcaacccagggttgca
ggcgggccacctgtcgaacctgcagactatcaacagaagctcatccgtgtcaatgaaaga
ggacctggtgcaaggaggagctgtaaccctcctcccaagaacgattcttcctcgtaccta
tcgatggacagctataataataaccagttaagtgctaatcggttacagtctttgtcgagc
acagatgtacggattggccaacctccccatgtgtatgtggcccatcaccagcggcagtac
agtgacgaaagcactttatatacgcacactcggtctactgcagtaccaaagcaacagagt
gttggcaactattataacagcatgcaagagttaccgactgacaactttaatcagtactat
aatcaggcccaagtcaggacctctagtgcttccttggccaatccccctacagagcaaaat
atggagagtgcagggcataacagatattactgcgttacagcaaggcagccagcccagtcg
gtctctcaggcatcactggtgaaagttgaaaactggaaaggttgcacagggacagagtcg
gcccagggactaagtgaaaggaactcgcctgctcccacaaaggtccagaaaccaaaatac
ccactacctcaccctgaagtacaggagaacagtggctattattggctggaggacagccat
gacaggtctcctgcaaccgtggaagagatgccatcggtaaaacccattggcgatgaaagg
ggaagccagaagagtaacaatggatatcatttagaatctcattacattggctttacccat
aacacacaggataacctcaagaactgtggtgttgttcagcagagaagtcagcaaaaagag
ccccagtggccagaagatgaaggcaagatttgtccacagaaaaccccaatgttgcactcc
ctagctcaagagagcaaacatttagcctccaaacaggtggcgcctccaaacagctacagg
caggatgctttagaccctcttgccacaaaacagcagcgacggagcgaccgttatgccacc
acattacggaatgaaattcaaatgagaagagccaagctacagaaaagcaaaagtgcagcc
accctgacggatcccgacgaggttgaagaggaagctgaaagctggaaggaggagtcagct
gagcactccacatcatcttcagatggctccttctccaacacttacaaggatcacctgaag
gaagctcaggccagagttcttggggctacatctttcaggagacgggatctggagcctgta
ttgcttgagcatccagcaagcccatctgataccttgccctgttaccccacaatgacatca
tctcatccacataaagatgttaacccccagcctggctttcctgaggccccacaaagcaaa
cctatccctgcagctgctggtggtgcttcccacaagtctcgcatcggtggcaggaaacgc
ttcacagctgaacagaaagtcagatcctactctgagccagacaagatgcatgaggtggga
gtgagcaagacccaccatcattccaataatgctgataagttcattacttttgcagatcga
cgcaaattctttgaatcaaccagcaagcctgcattcctaaaaccggcaaacaggccaaac
caacagggctccgtcgacgaacaaagtgaggtcagatcttccagaagactacaccctaat
gagactgaggagtcttggtatgagcggagagtccgtgccacctcctttggctacgaaagc
tctctgggagctcttcacgaggataaagataactatagggatataagcaagaagtactca
gacaggtatatgatgctggaacagcagcgcttaggtacttttgcagagtatgaggctacc
tggaatgagcaaaagaagccatcagaagcaaagacctctggaatgtaccactctgctgac
aacatcctggattcagggttcgaagagcatagtaaacctcagtacgtgcatgaaagatcc
aggtcatctccgtctgcagatttctatggaaagagtgttgttgtgcaagcaaagaagaaa
gctgaaaattctcaaaaagaccaaaaacttcctggggctaaaaacacagattgcgacatt
tctgtagcaagcctctctcctggttgtactgtttctctccagcctgcttacagcacagag
cagacctgctggctttctgtgcctgacagactttctgacggaggacacaaggaatgtaaa
ttggatgaaaagctacttgtgaatgacgaaagcacagaggacaagcacagatcagccagc
aggcagactccgccagaacagctgctgcgcccgcctgcggaaagccgagagagagctgtt
acgctgcccagtgactacggctacataattcaagaaggggaaactgaaatcaagaacaga
gattttaacaacgctgttcccacttacttagagagccacaccctaaatgataatcgcatc
agatctcaaagcataggactggataatcagtctaccactataactgcagcaccattcagt
aagaagaaggggcctgtgcctcagaggcctcctccgcctaagctggataaatacaaacgt
caagacatccagtcctccttgatagactcttcagaatcgcttctgagttcacaaagggct
gttgggctttgttcccccagcatagaggggccgctgagtgccatccctgccccagccttg
aacactgcttccactgcagcagaacctgcccgggctgccagtcagtctggggagacccag
cacagaaaggtgctggagaatgagcacagaactgtagaaaaacctgacgttgtgcaccaa
accaccacctcctccaagtatccctgtcttcttaagccttctatggatgttcctagatca
ccttctccacagttcgccccacagagacttactgataaaccacctgtctccataaaaaat
gaagctccatcaagaatcgaaaaagtaatggagaacaatacaactgtcaaaatggtgcct
atcaagattcttcattccgaaagccattctgaaaaggagagccgacagtatctcctccac
aacctcgaaccgatcagtgtgcccgacgagcaggagaaagaccagataaagactctgggc
actaaacagcagtcctactcccttttctgcgcttacacaagacagaaagaggagcagatg
aaggaggaacaaaacaggacatgcgacgtggcacaaaatgagctgctttgggcagagata
aaggatagtatttcactttctccagctaacagtgcagtgaaggctaatgacagggcagta
gatgacttgaagacagaggagctggccagagagattgtgggaaaggacagatcactggcc
gacatcttagatcccaatattaaaatgaagaccaccatggacctcatggaaggcattttc
cccaaagatgagcagctgttggaggatgcccagcaacgcaggaggattctcccaaaacag
aattctccaaaacctgcagaagaaaagaaaaacgaagagaacgcagcctccctggcaacc
agctcctcctattacaacacatcagccccgaaggcagagctgctaattaagatgaaggat
atgcaggagcagattgtagaggaagaggaggacttggaagacgagctggaccacgacctc
tcagagaagaagcaagagctgattgacagcataagcaggaagctgcaggtgctgcgtgaa
gcccgggagagcttgcacgaagacatccaggccaacatcgccctgggagaagaggtggag
gagattgtgaagcaagtgtgcaagaccaacgagtttgacaagttcaggatgttcattggc
gacctggacaaggtggtcagcctgctgctgtccctgtccgggcgactggctcgagtggag
aatgctttaaacaacctggacgagactgcctccacagaggaaaagcgcacactgacagac
aaaaggaagcttctcatcaggcagcacgaggacgcgaaggagctgaaggaaaacttggac
agaagggagcgagtggtctttgacatcgtggccagctacctgaatgaggaaaacctggcc
gactacgagcactttgtcaaaatgaagtcagccctcatcattgagcagcgcaaactggag
gataaaatcaagctgggcgaagagcagctgaagggtctgacggacagtcttcccccagag
agccgacagccggaacaccggatcaccttttga

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