Polyodon spathula (Mississippi paddlefish): 121327542
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Entry
121327542 CDS
T07273
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121327542
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121327542
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121327542
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121327542
Peptidases and inhibitors [BR:
pspa01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
121327542
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Others
121327542
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Others
121327542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
SnoaL_6
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
121327542
NCBI-ProteinID:
XP_041127550
LinkDB
All DBs
Position
15:complement(8543163..8597353)
Genome browser
AA seq
745 aa
AA seq
DB search
MQQHSALLLLIAAALALALEVPTDGSVGLLAEPQVAMFCGKLNVHINVQTGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQSWCKKGRKQCRSHPHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPSDANQLDSTELEEDDSDVWWGGADADYTDGSEPREVELEDTEEAEPALDED
DEDDDDEGEEEPEGEPSEHTTSIAMTTTTTTTTTESVEEVVREVCSEEAVTGPCRAMFPR
WYFDLASGQCVQFIYGGCGGNRNNFETQEYCLSVCGTVLPTTAASTPDAVDKYLETPGDE
NEHAHFQKAKESLEAKHRERMSQVMREWEEAERQAKNMPRVDKKAVIQHFQEKVESLEQE
AAGERQQLVETHMARVEAMLNDRRRIALENYLTALQADPPKPRHVFNLLKKYVRAEQKDR
QHTLKHFEHVHMVDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGIAEEIQDQVDEL
VQKEQDEVEEQLSALQSEPRVSYGNDALMPSLTESRTAPIDMLPSEEGGIGSDGLGYIHP
IGFVPANTENEVEPVDARPAPDRGLTTRPGSGLTGIKMDEIPEVRMEAEVRLSSGYEVHH
QKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVVEVDAAVTPE
ERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacattcggcgttgctgcttttaatagcggctgctttggctttggctttagag
gtgcccaccgatggatctgtgggtcttctagccgagccccaagtggccatgttctgtggg
aagctcaacgtgcacatcaacgtacagactggcaagtgggagtcagaccccagtgggacc
aagagctgcatcggcaccaaggagggcatcctgcagtactgccaggaggtgtatccagag
ctgcaaatcaccaacgtggtggaggctaaccagccggtgaccatccagagctggtgcaag
aaggggcgcaagcagtgccgcagccaccctcacatcgtggtgccctaccgctgcctggtg
ggagagtttgtgagtgatgccctgctggttcctgacaagtgcaaattcctccatcaggag
cgtatggacatgtgtgagagccacctgcactggcacaccgtcgccaaggagtcctgtggt
gaccgctcaatgaatctccatgactacggcatgcttctgccctgtgggattgaccgcttc
cgtggcgtggagttcgtgtgctgcccctccgacgccaaccaactggactccaccgagctg
gaggaggacgactcggacgtgtggtggggcggtgccgatgcagactacaccgacggcagt
gagccccgggaggtggagctagaagacactgaggaggcagagccagcactggatgaggat
gatgaggatgatgatgatgagggagaggaagagcccgagggagagcccagcgagcacacc
accagcatcgccatgacaaccaccaccaccaccaccacaaccgagtctgtagaggaggtt
gtcagagaggtgtgctccgaagaggcagtgactgggccgtgccgtgccatgttccctcgc
tggtacttcgacctggccagcggtcagtgtgtccagttcatctacggtggctgtggcggc
aaccgcaacaactttgagacacaggagtactgtctgtcagtgtgcggcaccgtgctgcca
actacagccgccagcacccccgatgcagtggacaagtatctggagactcctggtgatgag
aacgaacacgctcacttccagaaggccaaggagagcctggaggccaagcaccgcgagagg
atgtcacaggtgatgagagaatgggaggaggcagagagacaggccaagaacatgccgcgg
gttgacaagaaggctgtcatccagcacttccaggagaaggtagagtctctagagcaggag
gcagcgggcgagcggcagcagctggttgagactcacatggcgcgcgtggaggccatgctg
aacgaccgcaggcgcatcgccctcgagaactacctcactgcgctgcaggctgatccccca
aagccccgtcatgttttcaacctgctgaagaagtatgtgcgtgccgagcagaaagaccga
cagcacacgctcaagcactttgagcatgtccacatggttgatcccaagaaggctgcccag
atccgaccccaggttttgactcacctgcgggtgatcgaggagcgaatgaatcagagtcta
ggactgctctacaaggtacctggaattgcagaagagatccaggatcaagtggacgagctg
gtgcagaaggagcaggatgaggtggaggagcagctgtcagccctgcagagtgagcctcgg
gtcagctacgggaatgacgccctcatgccatcgctaacggagagccgtactgcccccatc
gacatgctgccctccgaggaaggaggcataggctcggacgggttgggatacatacaccct
atcggcttcgtgcccgccaacaccgagaacgaagtggagcctgtggatgctcgtcctgct
cctgacagaggactcaccacccggccaggctccggcctcactggcatcaagatggatgag
atccctgaagtgaggatggaggcagaggtccgactcagctctggatatgaggtgcaccac
cagaaactggttttctttgcagaagatgtgggctcgaataaaggagctatcattgggctg
atggtgggaggtgttgtcatagcaacggtcattgtcatcaccttggtgatgctgaggaag
aaacagtacacctccatccatcatggtgttgtcgaggtggacgcagcagtgacccctgag
gaacgccacctctccaagatgcagcagaacggttacgagaaccccacctacaagttcttt
gagcagatgcagaactag
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