Polyodon spathula (Mississippi paddlefish): 121327564
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Entry
121327564 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121327564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121327564
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
121327564
Prokaryotic type
Archaeal type
TFE
121327564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
121327564
NCBI-ProteinID:
XP_041127590
LinkDB
All DBs
Position
15:21956339..21983031
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AA seq
443 aa
AA seq
DB search
MTEPEVLTEVPASLKRLAKEVVRGFYGVEHALALDILIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPCCFSTFTDLEANQLFDPMTGTFCCTFCQTEVEEDESALPKKDARTLVARF
NDQIEPIYVLLRETEDINLSHDLLEPEPAEIPALKQSRERAAAALGTSAGAHRENWATKG
AYEDFYTQNVTISMEEQEEQKRSASEGKTPKERPVWLSESTVKGAYSEADDPKEGGMGVD
GLRGHDEGQSMQLDENEEVMRALLIHEKRSAGMNSVAAAGGAGAGAGVFLSGANASDSES
DTSESDEDSPPHPVAQHYRRNKDDDDDDDEFEEVGNEPTVLVAGRPHSYSEVSQRPELVT
QMSPEEKEAYIEMGQKMFQDMYE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacctgaggttctgacagaggtgcctgcctccctgaagcgcctggccaaggaa
gtggtgcgcgggttctatggggtggaacatgcgttggccttagacatccttatccgaaac
ccttgtgtaagagaggaggacatgctggaactgctaaagtttgacaggaagcagctgcgc
tcggtcctgaacacactgaagggggacaagttcatcaagtgccgcatgagggtggagacc
gctcccgacgggaagaccacccggcacaactattacttcatcaactacaggctgctggtc
aacgtggtcaagtacaagctggaccacatgaggaggcggattgagacggacgagagggac
tccaccaaccgtgcctccttcaagtgcccctgctgcttcagtacctttaccgacctggaa
gcgaaccagctctttgaccccatgacaggaacattctgttgtactttctgtcaaacggag
gttgaagaggatgagtctgctttgccgaaaaaagatgctaggacactagtggctaggttt
aatgatcaaatcgagccgatttatgtcctgcttagagaaactgaagacatcaacctgtcc
catgatttactggaaccagagccagctgagatcccagcactcaagcagagcagggagcga
gctgcggcggctttaggaacctctgctggagcccaccgggagaactgggccaccaagggt
gcctacgaagacttctacacccagaacgtcactatcagcatggaggagcaggaggaacag
aaacgttcagccagcgagggcaagactcccaaggagaggcctgtgtggctttcagagagt
actgtcaagggggcgtacagcgaggctgatgacccgaaggaaggtggaatgggtgttgat
ggcttacgtggtcatgatgaagggcagagcatgcagctggatgagaacgaggaggttatg
cgggccctgctgatccacgagaagaggagtgctggcatgaactctgtggcggcggcaggg
ggtgcgggtgcaggggctggcgtgtttctctcaggcgccaatgccagtgactcagagagt
gacaccagtgagtctgacgaggattctcctccccaccctgtggctcagcactacagaaga
aacaaggatgatgatgatgatgatgatgagtttgaggaggtgggcaatgagcctacagtt
ctagtggctggtcggcctcactcctacagtgaggtcagtcagcggcctgagcttgtcaca
cagatgagccctgaggagaaagaagcttacattgaaatgggacaaaagatgttccaggat
atgtatgagtaa
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