Polyodon spathula (Mississippi paddlefish): 121327569
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Entry
121327569 CDS
T07273
Name
(RefSeq) AF4/FMR2 family member 3-like isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121327569
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121327569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
121327569
NCBI-ProteinID:
XP_041127595
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All DBs
Position
15:7064916..7130963
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AA seq
941 aa
AA seq
DB search
MPTVFEKETKVASIFLMVHLSSQVSGTRDSNCVEEILREMTHSWPPPLTAINIPGNVVPG
NFTFHAKDPKQHTIGYNKQKRCDVPAKSPPQRKLQKSILEDDLTISSDEDDNVKVSKGSV
LQVIPDSASMQQRCRRQQQQPSGKRSRHSSESSSTSSDSDSNSQSDSESENSCSDTDGSK
PLHSSSPEPEQPSPTKWQLNKWLNKVSPSNKNTVINDDSGLHDLNNANKLTSQFKSDRLQ
SGEDTVLHLAELKERENHSASTAALRPRVAHKAPRPKSATQKPSSFTEASPQKGLFCKKQ
AERTETSSEYKLNCWLRAVEHSTENEVPEPSLEVQPKQRPHTNNSGKRKDLEAERNRQKG
PVTIVSKSKEFVTTESSSTSSSSSSSSSSSSSYSSDSDSDVDRANPLVVAKVPADSTSPA
CSLRQRECWSGGLGRVRGSGRARSVYTRAAGPLSSSLEEQLYTLVPFGRNELPSTLKETA
ELKSLLVKIDLTLLTRVPRVVTRELSASKTESESKEASMRHENKSGNHPAETEPAKSRRK
RKCENGVGSKRSHTDKESSAAFTFSNSNTAYTDISIHDFPEPFSKSDRRLLSPLSSMSDQ
LEHRLNGCDFRSLDILRDSSGLTPGSVCKYRKQEIKSPAPEMNKVHHAVLENIHLGSSHQ
SQREPWTVPQWQRDSRRPRLHFDDVAHNADYYMQEAKRMKHKADAMCDKFGKAVNYIDAA
LSFIECGKAMEEGPVEDKSPYTMYSETAELIRYAMRLNSHSGPHASQEDKQLAVLCFRCL
ALLYWRMFRLKKDPAIKYSKALLDFFKTSARAVNVPYPWSGSGKSTGTSSPMSPSPSPVS
SVGSQGSSCSSTTVPMPSSMLITIPQRIHQMAANHFNITNSVLYSYEYWEVSDNLAKENK
EFFNDLNTLMRPLSLHSSMTHLVQYTRQGLHWIRNSTQMSH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtctttgaaaaggagaccaaagttgcaagcatctttttgatggttcattta
agcagtcaggtcagtggaaccagagacagcaactgtgttgaggaaatattgcgggagatg
acccattcttggcctccccccctcactgctatcaacatccctggaaatgtggtgcccggc
aatttcacatttcatgccaaggatccgaagcagcacactattgggtacaacaaacaaaag
aggtgtgatgttccagcaaaaagccctccccagcgcaagcttcagaaatcgatattggag
gatgacctgacaatcagcagcgatgaggatgacaatgtcaaggtgtcaaaggggtcggtt
cttcaggtcattcccgacagtgcttcgatgcagcagcggtgccggcggcagcagcagcag
cccagtggcaagagatcaagacattccagtgaaagttccagcacctccagtgactcagac
agcaactcccagtcagactcagagagtgaaaacagctgcagtgataccgatggcagcaaa
cctctacacagctctagcccagagccagaacagccctcacctactaagtggcagctgaat
aaatggcttaacaaggttagcccatccaacaagaacacagtcattaatgatgacagtggt
ctccatgatttaaataatgcaaacaaattaacttcacagttcaagtcagaccgtctgcaa
agtggtgaagacactgtgctgcacttggccgaactcaaggaaagagaaaaccacagcgca
agcacagccgcgttgaggcctagggtcgcgcacaaagccccgcggcctaaaagtgccaca
cagaaaccgtcatccttcactgaagccagcccccagaaggggctattttgtaaaaagcag
gcagaaaggacagagacatctagtgagtataaactgaactgctggctgagagctgtggag
cacagcacagagaatgaagttccagagcctagcttggaggtacagcccaagcaaaggcct
cacacaaacaattctggcaaaaggaaagatttagaggccgagaggaacagacagaaagga
ccggtcacaattgtttcaaaatccaaggagtttgtaacgactgaatcctcctccacttca
tcctcctcctcttcctcttcatcttcctcctcatcttactcctcagattcagactcggac
gtggacagagctaaccctctcgtcgtagctaaagtcccagccgactccacctctcccgcc
tgcagcctgaggcagagagagtgctggagcgggggcctgggcagggtcaggggctctggt
agagcgcgctcagtatacaccagagcagctggaccgctcagcagcagcttggaggagcag
ctctatactttagtgcctttcggtcgcaacgagctgccctcgaccctcaaggaaactgcg
gagctcaagtccctcctagtgaagattgacctgacgctcctgacccgagtcccaagagtg
gtcactagagagctctctgcttccaagactgagagcgagagcaaggaggccagcatgagg
cacgagaataaatctggaaaccaccctgcagagacagagcctgcaaaaagcaggaggaaa
cgcaagtgtgaaaacggagtaggcagcaagaggagtcacacagacaaagagtcttctgca
gccttcaccttttccaatagcaacacagcttacacagatatcagcatccatgactttcct
gaaccatttagtaaaagcgacaggaggcttctgtccccgctgtcttcaatgtctgaccag
ttagaacacagattgaacggctgtgacttccgctctttagacatactgagggacagcagt
gggttgactcctggctctgtctgcaaataccgcaagcaggagatcaaatcccccgcgcca
gagatgaataaagtgcaccatgcagttttggagaacatccatctcggcagtagccatcaa
agccagcgtgagccgtggactgtgccccagtggcagagggattccaggagacctcggctg
cacttcgatgatgtcgcacacaatgcagattattacatgcaggaggctaaaaggatgaag
cataaagctgatgcaatgtgtgacaagtttggaaaggcagtgaattacattgatgcagca
ctgtcgttcatcgagtgtgggaaggcaatggaagaaggcccggttgaagacaaatcacca
tacaccatgtactctgaaaccgcggagctaatcagatatgctatgaggctgaatagccac
tcaggtccgcatgccagtcaggaagacaaacagcttgctgtgttgtgtttccgttgctta
gctcttctgtactggagaatgttcagattgaagaaggaccctgctataaagtactccaaa
gcactccttgacttctttaagacctcagccagagcggtcaatgtaccatacccatggagt
ggcagtggaaagagcactggcacgtcctcaccgatgtcccccagcccatcccctgtcagc
tccgtagggtctcagggcagcagctgcagcagcaccactgtacctatgccttcctccatg
ctcatcaccattccccagcgcatccaccagatggcagcaaatcacttcaacatcaccaat
agtgtcctgtacagctatgagtactgggaggtttctgacaacttagccaaagaaaacaaa
gagttctttaatgaccttaatacattgatgagaccgctgtcgctgcacagtagtatgaca
catctagttcagtacaccagacaaggactacactggatacggaatagcactcagatgtcc
cattga
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