Polyodon spathula (Mississippi paddlefish): 121327597
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Entry
121327597 CDS
T07273
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121327597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121327597
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121327597
04031 GTP-binding proteins [BR:
pspa04031
]
121327597
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
121327597
Others
Specific organelles associated proteins
Auto phagosome
121327597
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121327597
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
121327597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
SRPRB
G-alpha
FeoB_N
PduV-EutP
Sarcoglycan_2_C
DUF5580_C
TniB
Motif
Other DBs
NCBI-GeneID:
121327597
NCBI-ProteinID:
XP_041127637
LinkDB
All DBs
Position
15:complement(2031083..2033540)
Genome browser
AA seq
233 aa
AA seq
DB search
MAHNENRNVYGSPARYHTRGSTRLHPEYDCLQTRIFKIIVIGDSNVGKTCLSYRFCGGKF
LQNPEATIGVDFRERTVEIDGEKIKIQIWDTAGQERFRKSMVEHYYRNVHAIVFVYDITK
LSTFESLPDWIEECARHSVSPSVPRIMVGNKCDLTDTCQISTSSAQRLADNYNLPLFETS
AKDPTEKEHVDAIFMTLAYKLKNHKPLRLKQLPRESSMVHLSQEEDAQSPCLC
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggctcataatgagaacaggaatgtgtacggctctcctgcaaggtaccatacccggggt
agcacacggctgcaccccgaatatgactgcttgcaaacgcgaatatttaaaataattgtt
attggtgactcaaacgtgggaaaaacctgcttgagttaccggttttgtggtgggaaattc
ctacaaaatccagaagctactatcggggtggattttcgggaacggactgtggaaatagat
ggagagaaaataaagattcagatatgggacactgccgggcaggagagattccgcaaaagc
atggtggaacactactacaggaatgttcacgccatcgtcttcgtgtatgacatcacaaag
ctctccacgtttgagagcttgccagactggattgaggaatgcgccagacattccgtctct
ccttccgtgccacggatcatggttggcaacaagtgtgacctaacggacacatgtcagatc
tctacttcctctgcccagcggttggcggataactataacctgcccttgtttgagacttct
gcgaaggaccccactgaaaaagagcacgttgatgccatttttatgacactggcttacaaa
ctgaagaaccacaaacccttaagactaaaacagctacctcgggagagcagtatggtacat
ctttctcaggaagaagatgcccagagcccttgtctgtgctaa
DBGET
integrated database retrieval system
