Polyodon spathula (Mississippi paddlefish): 121327610
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Entry
121327610 CDS
T07273
Name
(RefSeq) transcription factor Sox-21-B-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121327610
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121327610
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121327610
NCBI-ProteinID:
XP_041127655
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Position
15:26364270..26365925
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AA seq
247 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTETEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPIPYSLGDHEGLKASGLHGGTLADSL
LANPDKAAAAAAAAAARVFFNPAAAANPYSFFDLGSKMTDISPHSFPYGSPLGYPSGGTA
FSGAGAIGSGTHTHTHSHPSPSNPGYMIPCNCSGWPSPGLQPPLAYILLPGMGKPQLEPY
PAYAAAL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccgatggatcacgtaaagcgccccatgaatgctttcatggtgtggtcgaga
gctcagcgccgaaaaatggctcaggaaaaccctaaaatgcacaactctgaaattagtaaa
aggttgggagccgaatggaaacttctgacggagactgagaagagaccgtttattgacgaa
gctaaacgactgagagctatgcatatgaaggaacaccccgattataaatacagacctaga
cggaaacctaagactttaatgaaaaaagacaagtttgcctttccgataccctacagcctg
ggcgatcacgaggggttaaaggcgagcggcttacacgggggaacactggcagactcctta
cttgcgaacccggataaagcagcagcggcagctgcggcagcagcagccagagtgttcttc
aacccagcagctgccgcgaatccatactcatttttcgacctgggctcgaagatgacagat
atctctccacactcatttccttacgggtcccctctgggataccctagtggaggaacagct
ttctctggggcaggtgctatcggcagtgggacccatactcacactcactcgcatccttcc
ccaagcaatcctggctacatgatcccttgtaactgcagcggctggccctctccgggactc
cagccacctctagcttacatcttactacctggaatgggcaaaccccaactagaaccgtac
cctgcctatgcagctgctttatga
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