Polyodon spathula (Mississippi paddlefish): 121327645
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Entry
121327645 CDS
T07273
Name
(RefSeq) TBC1 domain family member 8-like
KO
K19951
TBC1 domain family member 8/9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121327645
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121327645
Endosome - Golgi transport
Rab GTPases and associated proteins
121327645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
121327645
NCBI-ProteinID:
XP_041127711
LinkDB
All DBs
Position
15:6889162..6949676
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AA seq
1131 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTEKSSSYFVLQRRRGHGDCGGKITGLLVGALDAVLDSNARVA
PFRILLQVPGSQVYWAIASGAVVEEINQHWDWLAQNLLHTLPVFDNKEDITSFVSGKIKG
LIAEESRSKLAEQEEDPEKFRDALVKFETRFSLPSSEKLVTYYSCCCWKGRVPRQGWLYL
SINHLSFYSFLLGKEVKLVIPWADVTKLERSSTSFITDTIRVTTRSKERDFSMFLSIDEA
FRIMEQLADITIRRLLDNEVFELDQSLQEPAHITKRVLEERAQKEYFRALFRLPRQERLQ
EVVNCSLWTPFSRCHTAGTVYTSDSYVCFISKEEGCCTLVIPLREVISIEKMENTSLLPN
PVIVSIRSKKAFQFIEIKNRDSLVENMRKRLESVQHKQQTCHKKTRSKELISPLPYYSLY
YDDMCTDSEAIEPAGKQNRHSLNEEALMSTFHHTEPETSDSRVTMEQVKESLWQDHFSEY
GRRSCMFRTEKIRKLVAMGIPESLRGELWLTFSDAITDLASHPDYYANLVEESMGKCCMA
TEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAYRNPKIGYCQSMNILASVLLLYAKE
EEAFWLLVAVCEKMLPDYFTRRVIGAQVDQSVFEELIKERLPELSEHLTDLSALSSISLS
WFLTLFLSIMPFESAIRVVDCFFFEGIKAIFQLGLAVIDANAVDLCNSKDDGQAVMILTR
FLDHVKNQESPLLPITNQHSCFEDDKESFQDTEIADLIRDSYEKFGDMTVEQIERLRCRH
RIQVLQTHEDTAKENTLRVVAPDILLTLEELGEVYDLFKREHFINCYWGENVPVLQYHEP
SLQYVDQYRIDRPQFKNLYNLLSPWMCGVHTDTVAHRAFRLLDENMDSLINFKEFAVCLD
TMYCEELNEKIRLLYRLHIPPALNENDGEEQSPLKTPLLSTTRPLCVASSNGEANDYQEQ
LRQMLKDLAKDKEKNSEKELPTMNQREFIQFCKTLYSMFHEDPNENELCQAIATVTTLLL
QIGEVGQRIRSLGSTSEESSGNDDGGDAAVCSRVPEEDSVFMDTRDTTRKNSQASTISEG
EWTVTFEQILASLLTEQSLVNFFEKPVDLKTKIKSAKLNQYDQRITPLLIQ
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaaaccggaggaagttctgctgaaaaacgctttgaagctttgggtgaccgag
aaatccagctcgtattttgttttgcagcgcagaaggggacatggagattgtgggggaaaa
ataacaggcctcttggttggtgctctagatgctgtgttggactccaatgcccgagttgcc
cctttccgaatcctgctgcaggtaccagggtctcaggtgtactgggccatcgccagtggt
gccgtggtagaggagataaaccaacactgggattggctcgcgcagaacctgctccacacc
ctgccagtcttcgacaacaaagaggacatcaccagctttgtcagtggtaaaatcaaggga
ctgatcgcagaggagtcgaggagcaagctggctgagcaggaagaggatcccgagaagttc
cgagatgccttggtgaaattcgagacacgcttcagtctccccagctcggagaagctggtc
acctactactcctgctgctgctggaaggggcgggtccccaggcagggctggctgtatctc
agcatcaatcacctctccttctactcatttctactcggcaaggaagtgaaactcgtaatc
ccctgggctgatgtcacaaagctagaaaggagctccaccagtttcatcacggacaccatc
cgcgtaacaacacgaagcaaagagcgcgacttctccatgttcctcagcatcgacgaggcc
ttccggatcatggaacagctggcagacatcacaatccgaaggctgctggacaacgaggtg
tttgagctagaccagtctctgcaggagccagcacacataacaaagagggtcctggaggag
agggcccaaaaggagtatttccgtgccctgttccggctgccacggcaggagagactgcag
gaggtggtgaactgctccctctggacgcccttcagccgctgtcacactgcaggaacagtg
tatacctccgacagctatgtctgcttcatcagcaaagaagaggggtgctgcaccctggtc
attccgctcagggaggtgatctcaatagagaagatggagaacaccagccttttgcccaac
ccggttatcgtcagcatacggagcaagaaggcatttcagttcattgagatcaaaaacaga
gacagcctggtggagaatatgagaaagcgcctggagagtgtgcaacataaacaacagaca
tgccacaaaaagacaaggagcaaggagctgatctctcctctgccgtattactcattatac
tacgatgacatgtgtacagatagcgaggccatcgagccagctggaaaacagaacagacat
tcgctgaatgaagaagctttaatgtctacttttcatcacactgaaccggaaacttcggac
tccagagttacaatggagcaggttaaagagagtctgtggcaggatcatttttcggagtat
ggccgaaggagctgcatgttccgaacggagaagatcagaaaactggttgccatggggatc
ccagagtctctgagaggggagctgtggctgactttttcagatgctatcactgaccttgcc
tcccatcctgactattatgctaatcttgtggaggaatccatgggcaagtgttgcatggca
actgaggagattgagcgtgacctgcaccgatctctgccagagcacccggcgttccagaat
gagaccgggatagcagccttacgcagagtcttgacagcatacgcttacaggaaccctaaa
atcggatactgtcagtccatgaatatcttggcctctgtgctgctgctgtatgccaaagaa
gaggaagccttctggctgctggtcgcagtgtgtgagaagatgctgccagattacttcact
cggcgagtcattggagcccaggtagaccagtctgtgtttgaggagctgattaaggaacgc
ctccctgagctgtcagagcacctgacagacctgtccgccctctcctccatctcgctctcc
tggttcctcacccttttcctcagcatcatgcccttcgagagtgccatccgtgtggtagac
tgctttttctttgaaggcatcaaagccattttccagctgggcttggccgtgatagatgct
aatgcagtggatctttgcaacagcaaggacgacgggcaagctgtgatgatactaaccaga
tttctagaccatgtcaaaaaccaggaaagtcccttgctccccattaccaatcagcactcc
tgttttgaagatgacaaggaatcgttccaggatacagaaatagctgacctcatcagggac
tcttatgagaaatttggagacatgacagtggagcagattgaacgtttgcgatgcagacac
agaatccaggtgctgcaaactcatgaagacactgccaaggaaaacacactgagagttgtg
gcgccagacattctgctgacactagaagaattaggagaagtttatgacttgttcaagaga
gagcactttataaactgctactggggtgagaatgtgccggtgctgcagtaccacgagccc
agtctgcagtatgtggaccagtacaggatagaccggccacagttcaagaacctgtacaac
ctgctgtcaccgtggatgtgtggggtccacacggacactgtggcacacagggctttccgc
ctgcttgatgagaacatggactcactcatcaacttcaaagagtttgcagtttgcctggat
acaatgtactgtgaagagctgaacgaaaaaatcagactgctgtacaggctgcatatcccc
cctgctcttaacgaaaatgatggagaggaacagtcacccctaaagacacccttgttgtct
actacgaggcctttgtgtgtagcatcctccaatggtgaggccaatgattaccaagagcag
ttgagacaaatgctgaaggatctagccaaagacaaagagaagaacagtgagaaagaattg
cccacgatgaaccagagagaattcatccagttctgtaaaacgctgtacagcatgtttcac
gaggacccaaatgaaaatgaactgtgccaagctatcgccacggtgaccacgctgctgctt
cagattggggaagtggggcagagaatccgcagcctaggaagcacgtccgaggagtcctct
ggcaacgacgatggcggagatgcagctgtttgctccagagtgccagaggaggactctgtg
ttcatggacaccagagacaccactaggaaaaactcccaagcatcgacaatctctgaagga
gaatggactgtgacattcgagcagatcttggcttctcttctcacagagcagtcgttggtt
aacttctttgagaaaccagtggacttgaagaccaaaatcaaaagtgcaaaactaaaccag
tatgatcagagaataaccccattgttgattcagtag
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