Polyodon spathula (Mississippi paddlefish): 121327647
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Entry
121327647 CDS
T07273
Name
(RefSeq) immunoglobulin superfamily member 3-like
KO
K06522
immunoglobulin superfamily, member 2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121327647
04090 CD molecules [BR:
pspa04090
]
121327647
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121327647
CD molecules [BR:
pspa04090
]
Proteins
121327647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
Ig_2
DUF4652
DUF3821
BARF1_ig2
Motif
Other DBs
NCBI-GeneID:
121327647
NCBI-ProteinID:
XP_041127714
LinkDB
All DBs
Position
15:20412217..20500793
Genome browser
AA seq
1038 aa
AA seq
DB search
MGSNMNMECAVVFLALLLFGTSSAKRVVTVQTGTLYRTVDSHITIWCNVSGYQGAMEQDF
QWSIYLSSAPEREIQIISTKDPNYAYALYGERVRSKEVYIERVSGDSVLLHITKLQQQDQ
GEYECYTPNTDTHYLGVYSAKMNLTVIPDTLSVSSAGQTLSKVEGEPLSLTCEVSKQTFQ
HSHLSVGWFLHTAGQTAAQEIITLSRDFVLRPGGAYRQRYSSGDVRLDKTGSTSYKLTIY
MLQPSDQGEIYCEATEWIQDPDRSWFALTRKQSDKNVVNIQATDKEFNIQINTERRAYTT
GEPAELRCVIDAQSIPERYFSVSWVFNSTQVAVMGPNAVPVLNGDYALREGAGKLTFRKE
SDAIYLLKINQLRQEDTGKYICRVTEREKTATGDFVDKNKRSRNVQISVQPLKSNITVSV
TSNSSSVPEGSAVHFTCTVNSVTENQGRLSVSWKLTDKQSQAREIVSVDQEGMVVPSPSY
RERSSYGEVRVERVRMGTFTLSIYNTLPKDQGLYTCTVAEWVKGPRDEWETIGEKSAGTP
VTVTAVESIFFMAASSRTPSVTYNESFDLQCIVKPRYNPRVPASVTWRFKPVNGTEFQDL
VTFTRDGSLQWGDRYSSFGIRTTIDKSASNSNFRLSISRASRQEAGTYQCAAELWRKNYD
NTWTKITNRTSNLLGIKVLQPASKLQVSKSDMTLAFVEDSRVPLNCTIASQTSPDAQYTV
LWYAMKEDETDAELLLKINHNSAFEYGTYAEEERLKSRVQSERLSPQLYSLTLHQAELSD
SGSYYCRVEEWLLDPNNAWYKLTEETSGLTKVTIKRPEIRLQVEESESNMTVKEEDAFTL
GCSVSSQSSKDSRFSVSWYVISSENPERECVFSIGHDNVFGNGNCSSSEGQGPGSRLQFE
RTSAESYSLTIQKARLSDSGNYYCQVEEWLLDPRNAWYHLAEANSGVTVVSVLEQGSSLQ
SVICSNDSLFYFIFFYPFPIFGILLITILLVRYKARNSSKNSEGKNGAPLLWIKEPHINY
SPTCLEAPSLSLHPGSVE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggggtctaatatgaacatggagtgtgctgtggttttccttgcactgctgttatttggc
acaagttcagccaagcgtgtggtgacagttcagacgggcactctgtaccggacagtggac
tcccacattacaatctggtgcaatgttagtggctaccagggtgctatggagcaagacttc
caatggtctatctacctgagctctgcccctgagcgggagatccagatcatcagcaccaag
gaccccaactatgcctacgccctgtacggagagcgagtgcgcagcaaagaagtctacatc
gagagggtgagcggggactcggtactgctgcacatcacaaaactccaacagcaggaccag
ggggagtacgagtgctacacacccaacactgacactcactacctgggagtgtacagtgcc
aaaatgaacctcaccgttataccagacactctgagtgtgtcctcggctggccagactctc
agcaaagtggaaggggaacctctgagtcttacctgcgaggtttcaaagcagacattccag
cacagccacctctctgtgggctggttcctgcacacagccggccagacggctgcccaggag
atcatcactctctccagggactttgtgctgcgtccggggggagcgtataggcagcggtac
tcctcgggggacgtgcggcttgacaagactggcagcacctcctacaagctgaccatctac
atgctgcagccctcggaccagggcgagatctactgcgaggccacagagtggattcaggac
cccgacaggtcgtggtttgccttgaccagaaaacagtctgacaagaatgtggttaacata
caggccacagacaaagaattcaacatccagattaacacagagagacgggcctacacgacc
ggagagcctgcggagctcaggtgcgtcattgatgctcagagcatccctgaacgctacttc
tctgtgtcctgggtgttcaacagcacccaggtggctgtcatgggccccaacgccgtgcct
gtcctgaacggggactacgcattgagggagggggccggcaagctgaccttccgcaaggag
agtgatgccatctacctactgaagatcaaccagctgcgccaggaggacactgggaagtac
atctgccgtgtcacagagagagagaaaactgcgactggagacttcgttgacaaaaacaag
agatccaggaatgttcagatctctgttcagccactgaaaagcaacatcactgtgtcagtg
acaagcaattcgagcagtgtgcccgaaggcagcgccgttcattttacctgcactgtgaat
tctgtcacagagaaccaaggccgtctgtccgtgtcctggaagctgacggacaaacaaagc
caggcacgggagattgtgtctgtggaccaggagggcatggttgtcccgagcccttcatac
cgggagcgcagtagctatggggaggtgcgggtggagagagtgcggatgggcacattcacc
ctgtctatctacaacactctcccgaaggatcagggcctctacacttgcactgtcgcagag
tgggtcaaggggccgagagatgaatgggaaacgattggggagaagtcagccggcacacct
gtgactgtcaccgcagtggagtctattttcttcatggccgcttcttcgagaacccccagc
gttacctacaatgaatcctttgacctccagtgcatcgtcaaaccccgctacaacccccgg
gtacctgcctctgtgacctggcgcttcaagcctgttaacggcactgagttccaagacctg
gtcaccttcacccgcgatggcagcttgcagtggggagaccgctactccagcttcggcatt
agaactaccatcgacaagtcagcttccaacagcaacttccgcctcagcatcagcagggcc
agcaggcaggaagccggcacgtaccagtgcgctgccgagctgtggaggaaaaactacgac
aacacctggaccaagatcaccaacaggacctccaatctgctggggatcaaagtgctgcag
cctgcgagcaaactgcaagtcagcaaatctgacatgaccctggcgtttgtcgaagatagt
cgtgttccactcaactgcacgatcgcttctcagaccagcccggacgcccagtacacagtc
ctgtggtacgccatgaaagaggatgagacagacgctgagctcctactcaagatcaaccat
aactctgctttcgagtatggcacctacgcggaagaggagagactgaagagccgggtgcag
tctgagcgtctctccccgcagctctacagcctcaccctgcaccaggccgagctcagtgac
agcggcagctactactgcagagtggaggagtggctgctcgaccccaacaatgcctggtac
aagttaactgaggagacttcggggttaaccaaggtcactattaaacgcccagaaatcagg
cttcaggtagaggaatctgaatccaacatgacagtgaaagaggaggatgccttcacactg
ggctgcagcgtctcctcgcagtccagcaaagactcccgcttctccgtctcctggtatgtc
atcagcagtgagaaccccgagcgagagtgcgtcttctccatcggacatgacaacgtcttc
gggaacggcaactgcagctcctccgaggggcagggcccagggtccaggctgcagtttgaa
aggacctctgccgagtcctacagcttgacgatacagaaggccagactctcagattctggg
aactactactgtcaggtggaagagtggcttctcgacccaaggaatgcctggtaccacctg
gcagaggctaattctggagtgaccgttgtctctgtgcttgagcaaggttcttctctgcag
tctgtcatctgttccaatgactcgctcttctacttcatcttcttctacccgtttcccatt
ttcggaatcttgctgatcaccattctgctggtgcgctataaggctcgcaactccagcaag
aattcggagggtaaaaatggcgcccctctgctgtggatcaaagagcctcacatcaactac
tccccaacctgcctggaggcccccagcctgagcctccacccaggctctgtggagtaa
DBGET
integrated database retrieval system
