Polyodon spathula (Mississippi paddlefish): 121327677
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Entry
121327677 CDS
T07273
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme-like
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00500
Starch and sucrose metabolism
pspa01100
Metabolic pathways
Module
pspa_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
121327677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121327677
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
121327677
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121327677
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
Exo_endo_phos
hDGE_amylase
TreT_GT1
Motif
Other DBs
NCBI-GeneID:
121327677
NCBI-ProteinID:
XP_041127755
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All DBs
Position
15:37044440..37296755
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AA seq
687 aa
AA seq
DB search
MADCTDNVTVPGLKNLLQMDPFLKPFEKDFTRRYTRFNNQLMSIEGAEGGFDKYTRSYES
FGVNRQPDGSLYFKEWAPGAEAVFLAGDFNDWSTSSHPYNKREHGKWDLFVPPKVDQSPA
VPHGSKLKVVIRSRSGQLLYRISPWAKYVVRDHNNMIYDWVHWDPPQPYMHKHSRPKKPQ
SLRIYECHVGIASPEEKVASYSNFTYNVLPKIKDLGYNCIQLMAIMEHAYYASFGYQITS
FYAASSRYGNPEELKELVDTAHSMGIIVLLDVVHSHASKNTEDGLNQFDGTDSCFFHSGS
RGEHVLWGSRLFDYSNWEVLRFLLSNLRWWIEQYRFDGFRFDGVTSMLYHHHGIGTGFSG
DYSEYFGLHVDEDSLVYLMLANQMVHSLCPDYITIAEDVSGMPGLCCPINEGGTGFDYRL
SMAVPDKWIQILKELKDEDWNMGNIVHTLTNRRYGEKCIAYAESHDQALVGDKTLAFWLM
DAEMYTNMSKLSPLTQVIDRGIQLHKMIRLITHGLGGEGYLNFIGNEFGHPEWLDFPRKG
NNESYHYARRQFHLVEKDDLRYRELYNFDRDMNRVEEKYGWLSAPPANVSTQHEGDKIIA
FERGTVLFIFNFHPSNSYTDYRVGVEMSGKYKIVLDSDEAQYGGHQRLDHNTEFFTEAVP
YNGCSNSTMVYIPCRTAIVLANEDLSR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgactgcacggataatgttacagttcctggactgaagaacttactacaaatggat
ccgtttctgaagccatttgaaaaggacttcacaagaaggtacactcgctttaataatcag
ctgatgtccattgagggggctgaaggaggctttgataaatacacacgcagctatgagtcc
ttcggtgtgaacagacagcctgatggtagcctatatttcaaagagtgggccccaggagca
gaagctgtgtttcttgctggagattttaatgactggagtacttcctctcacccttacaac
aaacgagagcatggaaagtgggatctgtttgttccacccaaagtagatcaatctcctgct
gtcccccatggctcaaaactcaaggttgttatacgtagccgaagtggccagctactttat
cgaatttcaccctgggcaaagtatgttgttcgtgaccacaacaatatgatttatgattgg
gtgcactgggacccaccacaaccttacatgcacaagcattctcgccccaagaaaccacag
agcctacggatttatgaatgtcatgtgggaatagcgtcccctgaagagaaagtggcatct
tacagcaactttacatacaacgttcttcccaaaataaaggaccttgggtacaactgtatt
cagctaatggcaatcatggagcatgcatattatgccagctttggttaccaaataacaagt
ttctatgctgcatcaagtcgctatggaaacccggaggagctgaaggagcttgtggacact
gcccactcaatgggcatcattgtactgttggatgttgtccacagccatgcttccaaaaac
actgaagatggtttaaatcagtttgatggcactgattcttgcttcttccattctggatct
aggggagaacatgttctgtggggcagcagactttttgactactcaaactgggaagtttta
agatttttgctctccaatttgcgttggtggatagagcagtatcggtttgatggcttcaga
tttgatggagtgacttctatgttgtaccatcaccatggcattggtacagggttttcaggt
gactacagtgaatattttggtctacatgtggatgaagactccctagtttatctcatgctg
gcaaaccagatggttcacagtctctgtcctgattacattaccatagcagaggatgtttca
ggaatgcctggtctttgttgccctataaacgaaggaggtactgggtttgattaccgctta
tccatggctgtccctgataaatggatacagatacttaaggagctgaaggatgaagattgg
aatatgggcaacatagtgcacacattgacaaacagacgatatggcgagaaatgcattgca
tatgcagaaagtcatgatcaggcacttgtcggtgacaagacattggcattctggttaatg
gatgcagagatgtatacaaacatgagcaagctgtctcctttgactcaggtcattgatcgt
ggaatacagcttcacaaaatgatccgtctcatcactcatggacttggaggggagggctac
ctgaacttcatcggtaatgaatttggtcatccagaatggctagattttccaagaaaagga
aacaatgaaagctaccattatgccaggaggcaatttcatcttgtggagaaagatgacctc
cgctatagagaactgtataacttcgatagagatatgaacagagtggaggagaaatatggc
tggctctctgctccaccagccaatgtgagcacacagcacgaaggagacaagatcattgct
tttgagagagggaccgttctcttcatttttaacttccacccatccaatagctacactgat
tacagagtgggagtggagatgtcaggaaaatataaaattgtattggattcggatgaagct
caatacggaggccatcaaagattggaccacaacacagaattctttaccgaagctgtccct
tacaatggctgcagcaattcaacaatggtttacattccgtgcagaacagcaattgtgctt
gcaaatgaggatctttcccgttaa
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