Polyodon spathula (Mississippi paddlefish): 121327705
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Entry
121327705 CDS
T07273
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121327705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121327705
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
121327705
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
121327705
NCBI-ProteinID:
XP_041127787
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Position
15:complement(18050952..18060228)
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AA seq
589 aa
AA seq
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MAIHVEGLVAIILFYLLILFVGIWAAWKNKNSGTAAGTDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPGFGLAWAQAPFGYALSLIVGGMFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDMNINTSVIVSALIAIFYTLV
GGLYSVAYTDVVQLFCIFLGLWVSVPFALSNPAVSDIGVTAYKYVHQEPWLGSINPSDIY
MWLDNFFLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLVMAVPSVLIGAIGAST
DWNQTSYGPVQPKMKEESDMILPIVLQHLCPSYISFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLAFRQTASDREIVWVMRITIFVFGAVATAMALLTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVKGTNTYGSVAGYIFGLLLRISGGEPYLKLPPFIYYPGWTEQVKEHPLTGAI
EHVIVQKFPFKTISMLSSFLANVAFSYLFKYLFESGSLAPKYDFFDAVLTKHSKENMDKT
TLVNSNNIVLSELAPVKPRHSTTVAAGFVNKEALSDEDTSPNSSNNEHD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccacgtggaagggctggtagcaataattctgttctatctgctcattctgttt
gttggaatatgggctgcgtggaaaaacaaaaactccgggactgcagccgggacagatcgc
agtgaaaccatcatggttggcgggagagatatagggttatttgttgggggatttacaatg
acagctacatgggtcggcggaggatatatcaatgggacggcagaatatgtatacttaccc
gggtttggactagcctgggctcaggctccattcggatacgcacttagcctgatagtaggc
ggtatgttttttgctaaaccaatgcgctccagaggctacgttaccatgctggacccgttt
cagcagatctacggtaaaagaatgggagggttactcttcatccccgctctcatgggagag
atcttttggtcggcagctatcctatcagcgctaggtgcaactttgagtgtgatagtggac
atgaatatcaacacgtcagtcattgtctctgctctcatagcaatcttttacactctggtg
ggagggttgtattctgttgcctatacagatgtggttcagcttttctgcattttcttgggg
ctgtgggtcagtgtgccttttgcattgtccaacccagccgtgtcagatataggagtgacc
gcttataaatatgttcatcaggagccctggctgggatccatcaacccatcagatatatac
atgtggctggacaacttctttttattaatgctgggggggattccctggcaggtgtatttc
cagcgggttctttctgcctcctcagctacctatgcgcaagtattgtccttcctggcagcg
ttcggctgtttggtgatggctgtgccatctgttcttattggcgcaataggtgcatctaca
gactggaatcagacttcgtatgggcctgtgcagccgaagatgaaggaggagtcagacatg
attctgccaatagtactccagcatctttgcccctcatatatttcctttttcggtcttggg
gctgtgtcagctgcagtgatgtcatctgctgattcatcaatcctatctgcaagctccatg
tttgcccgtaacatctaccagcttgcatttagacaaacggcatctgatagagagatcgtg
tgggtaatgaggattaccattttcgtgtttggagctgtggcaacggccatggccctgtta
actggaacagtgtacggcctgtggtatttgagctcagacctcgtctacgtcatcatcttc
ccccagctgctgagtgtgctcttcgttaagggaacaaacacgtacgggtcagtggcggga
tatatctttggtttgcttttgaggatcagtggaggagaaccatatcttaaactccccccc
ttcatttactatcccggctggaccgaacaggtgaaagagcatcctctaacaggagcaata
gaacatgtcattgttcagaaattcccattcaaaaccatatcaatgttgtcctcttttttg
gcaaacgtggcattctcctacctattcaagtatctttttgaaagtggttcactggctcct
aaatatgacttcttcgatgctgttttgacaaagcacagcaaagaaaacatggataaaacc
acgttggttaacagcaacaatattgtactgtctgaattagcacctgtcaaaccaagacat
agcaccacggtcgctgctggattcgtaaacaaggaggctttaagtgatgaggatactagc
ccaaattcgtcaaacaatgaacatgactga
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