Polyodon spathula (Mississippi paddlefish): 121327710
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Entry
121327710 CDS
T07273
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121327710
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRNT
LRR_LRWD1
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
121327710
NCBI-ProteinID:
XP_041127793
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Position
15:complement(28088025..28093016)
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AA seq
865 aa
AA seq
DB search
MYIWILQITVLAVTSLTFIEMYDNYGEICQNLCSCEEKDEILTVSCENRGIVRLSEISPI
HFSMYHLLLTGNLLKKLSPNDFINYTGVIILHLGNNDIQEVETGAFNGLQGLKRLHLNNN
KIDILRDDTFVGLESLEYLQIDYNYISIIEPNVWSKLHQLQVLILNDNLLSSLPSNIFRY
VPLTHLDLRGNRLKMLPYIGLLEHMDKVVELQLEENLWNCSCELIALKAWLESISYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRAISEYEMRPHSPLSTIGYFHTTPAAVTASATS
SAVLRSSSKPTKGTRQSNKPRMRPTSRIPSKDTYNYGPIIAYQTKSPVPLECPTACTCNL
QISDLGLNVNCQERKIENIADLKPKPYNPKKMYLTGNYISVVLRSDFIDATGLDLLHFGN
NRIAVIQDRAFGDLTNLRRLYLNGNLIERLTADMFYGLQNIQYLYLEYNVIREIVSGTFQ
YVPNLQLLFLNNNLLRTLPGDIFSGLTLARLNLRSNHFTYLPVSGVLDQLRSLVQIDLYE
NPWDCTCDVVGMKIWLEQLNPGTVVNNVICGSPKKLSGEDMISIKSDFLCPDYSDIIVST
PPPSAELVPERTTTTETSIKYSTPPSSVPLSVLILSLLLIFIMSVFVAAGLFVVVMKKRK
KSQSDRTSTNNSDVSSFNLQYSVYSNRSVPKVKTPGGHVYEYIPHPLGHMCKNPIYRSRE
GDSVEDYRDLHELKVTYRNNTDVLDNRLISQPYSVSTIEPREESSPVQDAEHFYRGILEP
EKQAPGNNIEYKYSGPATYTYTPNCDVRRQYLHPERIRETVLYTTTPSTVFVEHNRNEYL
ELKAKLQVEPDYLEVLEKQTTFSQF
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtatatctggatattgcagatcaccgtgttggctgttacatctctgactttcatagag
atgtatgataattatggagaaatatgtcaaaatctttgttcttgtgaagagaaagatgag
atattaactgtgagttgcgaaaacagagggatagtcagactttcggaaatcagtccaata
catttctcaatgtatcatcttttgttaactgggaatcttttaaaaaaactgtctccaaat
gattttatcaattatactggtgttataattttacatttaggtaacaatgatatacaagaa
gttgaaacgggagcttttaatggacttcaaggattaaagagattgcatctcaacaataac
aagattgacattttaagggatgatacctttgttggacttgaaagtttggaatatctgcag
attgattataactacatcagcatcattgaacccaatgtctggagcaaactgcatcagctg
caagtgttgatcttaaatgataatttgttgtctagtctaccaagtaacatttttcgatat
gtccctttaacccatcttgacctgaggggaaacagactaaaaatgttgccctatataggc
cttttggaacacatggacaaagtagtggaattacagctggaagagaatctgtggaattgt
tcttgtgaacttattgctttgaaggcttggctggaaagcatttcctacaccgctcttgtt
ggagaggttgtgtgtgaaacacctttccgacttcatggtagagatctggatgaggtttca
aaacaggaactctgccctagaagagctatttcagaatatgaaatgagaccacactcacct
ttaagcactattggatattttcatacaacacctgctgcagtgacggcttcagctacatca
tctgcagttttaagatcttcatcaaaacccacaaagggtacccgtcagtcaaacaagcca
agaatgcggcccacgtctcggatcccatcaaaagacacgtataattatggaccaataatt
gcttatcagaccaaatccccagtgcctttggagtgtcctactgcctgcacgtgcaattta
caaatttctgacctgggactaaatgttaactgccaagaaagaaagattgaaaacattgct
gatttaaaaccgaaaccatacaatcctaaaaagatgtatcttacaggaaattacatctca
gtggtgcttagatctgacttcatagacgcaactggattagatttactccattttggtaac
aatcggatagccgtcatacaagacagggcttttggggatttaactaatttgcgcaggctt
tacttaaatggcaatttaatcgagcgactcactgcagatatgttttatggccttcagaat
atacagtatttatacttagaatataatgttataagagaaattgtttcaggtacctttcaa
tatgtaccaaatctccagctactttttctcaataacaatcttctgagaactttacctgga
gacatattttcaggtttgacactggccaggcttaatcttaggagtaaccatttcacatat
ctaccagtaagtggtgtgttagatcaactaagatcgctagtacaaattgatttatatgaa
aatccctgggactgtacatgtgatgtagtgggcatgaagatttggctggaacaacttaac
ccaggcaccgttgtaaacaatgtgatatgtgggtctccaaagaaattgtctggagaggat
atgatatccatcaagtcagattttctttgccctgattattctgatataatagtttcaact
cctcctccttctgcagaactagttccagaaagaaccaccacaacagaaacatctattaag
tatagtacaccaccaagttctgtaccattgtctgttttaattctaagccttctattgatt
ttcatcatgtcagtctttgtagctgcaggactttttgtggtagtaatgaagaaacgaaaa
aagtctcaaagcgaccgtacaagcaccaacaattcagatgtaagttcttttaacctccag
tacagtgtttacagcaacagatcagttcccaaagtaaagactcctggtgggcatgtgtat
gaatacatccctcatccactgggccacatgtgcaaaaatccaatttaccgatcaagagaa
ggggattctgttgaggattacagagatctacatgaattaaaagttacttacagaaataac
actgatgtgttagacaaccgtttaataagtcagccatacagtgtaagtaccatagaaccg
cgagaagaatcttcaccagtgcaagatgcagaacatttttacagaggtattttagagcca
gagaaacaagcacctggaaacaatattgaatataagtacagcggtcctgctacatatact
tacacgccaaactgtgatgtaaggcgtcaatatttgcatccagaaaggatacgagaaact
gtgctgtatactacaacaccaagtactgtgtttgttgaacacaacagaaatgagtatctg
gaattaaaagcgaaacttcaagttgagccggactacctcgaagttcttgagaaacagaca
actttcagccaattttaa
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