Polyodon spathula (Mississippi paddlefish): 121327764
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Entry
121327764 CDS
T07273
Name
(RefSeq) protein SON-like isoform X1
KO
K23718
protein SON
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121327764
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
121327764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
DND1_DSRM
dsrm
G-patch_2
Motif
Other DBs
NCBI-GeneID:
121327764
NCBI-ProteinID:
XP_041127885
LinkDB
All DBs
Position
15:2719783..2744438
Genome browser
AA seq
2025 aa
AA seq
DB search
MATNIEQIFRDFVMNKIKEIQDEEQHTGVESDAQPNGGVIPDLDKKDASDEAPGIEGNQE
ELTLTTESVQSGTVEGQESSQPDTEANVIAESSQAGEESGSKEGSETPRKKNKKHKRHKS
KKKKKKRKEEKRSRSRSGSSSESGVESDSELRSRSSVKSANVIPIVKETGASEEAPIAHR
AQKGEVEQKMKQDLSGTAEEQGNTQPAGEESGGETRRSKSKKQKKHANKKKKKKKKKEEK
EEKRSPSRSRSESTSGSGTDSESELKRFPLDSLLNSSDSQVDRPGAAVDKVVDTCTSLEP
RPEKDLSPPTGVVSDTSVSEMQLPAGITEVSISKQNGCSSGEIIIAPVHADVFDSTKGKD
SDDFVVKPEEEQAELAKETETKKDVSNPLAVKRESSEVKKTRESLSRSRSCSRSKKRSSR
RTPSKKSRSRSRSRQRALGKFSSRRGRSSSRRQSRSTSKKKRSQSSPKSKKRHSRSRSVK
RRSRSRLKLSRKSRSVSLKRSKRSKSRSRTRNRRSRSAKRKRSKSRSQSRNKCSKSKSRS
RSPRRRKRTCSRSQRRTRRSKSRSHSRTRQSKSRSITRNRRSRSRSPRRIKRSRSRCIIR
NRRSKSRSPRRNRRSKSKSPWRSRRSRSRSPRRNRHSKSRSPRRNRHSKSRSPRRNRHSK
SRSPRRNRHSKSRSPARRMRRSRAKSKSQRRNKRSKSRSLSRHRRSKSKSPKQKRHSKSK
SPKRNKCSKSKSPTRNKLSKSRYPSKDNRSESRSPSKDKMSKSGSPSKDKMPQSRSPSKD
KMPQSRSPSKDKMSKSRSPSKDKMSKSRSPSKDKMSKSRSPSKDKMSKSRSPSKDSRSES
RSPSKDKRSKSRSPSNDERSKSGSPSKDQRSQSRSPSKDQRSQSRSPSKDQRSQSRSPSK
DQRSKSRLPSEHERSKSRSPSDHERSKSRSPSKHERSQSRSPSKDKRSQSRSPERSKLSG
SKSPTKEFTKYKSGSPAKDQCSKSITPLNVEISTSPKPETALGPVYPTTDISTGPLCAMM
EEDSMPQSFAADRFSKSGSPIKVDWSELEFPLTNSPSLVNRECIEVSSLIKDTESNIMTD
ATWTALSPMTANCLTTESTTTDEHPVRSAYPSVDSSYNTSSLLREKSPPSVSSEFSESGS
PKPQQCSRSEITEKDFTLKSPPSIDRPLTSTLTHTCDQKPEFPMSDKCFKLESSKSDGNS
QSKSPATQSNLRSTSPVNDESSKSRSPVSDRCSKSESPTREDTSASTADRQSESKPTVAD
IFTGCSTPCISQPHSSCPPTAEMPSESLSPTRDTCSRSLSPALEDFPTSLPETDGCPKSP
IREKHSESPGLEQSSQSKSPAESACTKPEVPTKIDRSKSRSPPTNTKSSTRNKSSKSRSP
SVKKHSKSSKQKNCSRSGSPAKKSKSPSRRKRSRSPVRKKRSRSRSSSQKRRSKSRSPAR
KRSKSRSPIRRKRSRSDTRRKRSKSRSPKRRRSKSRSPFRKKRSKSRSRGRNRRSKSRSP
ARRKRSRSKSPAKKRSRSATRARRSRSKHRSRTRSISRPRRKSRSVSRDRRSRSAERRRR
TRYRSRSIERWRRSRSFNRRRVSRSPVLLLRRRRSISRTRRSPSKTPPRLTELDKAQLLE
IAKANAAAMCAKAGVPIPQSLKPTVIMQLPLPLPIPLPVEEKKKVVQKVTNSTILELTEK
CKQIAESKEDENEVLNKPHVSDDEEEEQPFGGQGARLGELKGISFSLSNPSVKTAARTEV
ALTKDFPVSSGSQHRKKEGDGAYGEWVLVDKGAEKESKDDVFTDTPVQPVDITLAMNERA
VAQKKLAENPFDINAICMLSRAQEQVDAWAQSSNLPGRFTGSTGAQVLSAEELSSSGPQA
WIRKDQFLRAAPVAGGVGEFLMRKMGWREGEGLGKYREGNTEPILIDFKTDRKGLVAEGE
KTQKSVNLTVMKDLLGKHPISALMELCNKRKWSPPEFVLVHDNGPDHRKNFLFKVMLNGS
EYQPSKASPTKKLARAMAATVALQAMGELSKEGMGNGPTFTSASS
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacatcgagcagattttccgtgatttcgtaatgaataaaatcaaagaaatc
caagacgaagagcaacacaccggtgtggagagcgatgcccagccaaatggaggtgtgatc
cctgatttggataagaaagatgccagcgatgaggctcctgggatcgaaggaaaccaggaa
gagctgaccctgacaacagaaagtgttcagtccggaactgttgaggggcaagagagctct
cagcctgatacagaagccaatgtgattgcagagagctcgcaggctggagaagagagtggc
agcaaagaagggagcgagacccccaggaagaagaacaagaagcacaagagacacaagagc
aagaagaagaagaagaaacggaaggaggagaagaggtcccgctcccgatcgggtagcagc
tcggagtctggagtggagtctgactcggaactgcggtcacgctccagtgtgaagagtgcc
aatgtgattcctattgtgaaggagactggggccagcgaagaggctcccatcgcccacagg
gcacagaagggagaggttgaacagaaaatgaaacaggacctttctgggactgcagaggaa
caagggaacacacagccagctggagaagagagtggtggtgaaacacgcagaagcaaatcc
aagaaacaaaaaaagcatgcaaacaagaaaaagaaaaagaagaaaaaaaaggaggagaaa
gaagagaagcgatcaccatctcgctccagatcggaaagcacttcaggatctgggacagat
tctgaatctgaattgaaaaggtttccgttggattctctgttaaactcctcagacagccag
gtggacaggcctggtgctgctgttgataaagtggttgacacttgtacgtcactggagcca
agacctgagaaggatttaagtcctcctacaggggtggtatctgacactagtgtcagtgaa
atgcaacttccagcaggcattacagaagtttccatctcaaaacaaaatggttgttcatca
ggagagattatcattgcccctgttcatgcagatgttttcgactctactaaaggtaaggac
tccgatgattttgttgtgaaacctgaggaagagcaagctgaacttgctaaagagactgaa
acaaagaaagatgtgagtaacccgctggcagttaaaagagaaagcagtgaagtgaaaaag
acaagagaaagtctttcaaggtctcgatcctgttcaagatccaagaaacgcagctctaga
cggaccccatctaagaagagtcgcagccggtcaaggagcaggcaacgtgctttaggaaag
tttagctcaagaaggggtcgttcctcatcaagaagacaatcaaggtcgacttctaaaaag
aagcgaagtcaatcttcacccaagtctaaaaaaaggcattccagatcaagatcagtcaag
cgtagatcgaggtctcgcctaaagttaagccgtaaatcgagatcggtatcccttaaaagg
tctaagcgctcaaagtctaggtctcgcacaagaaacagaagatctagatcggccaagcgt
aagcgttcaaaatctagatcccaatcgcgaaacaagtgttcaaagtcaaaatcgaggtct
aggtcaccaagacgaagaaagcgaacatgttctagatcccaacgtagaaccagacggtca
aaatctaggtcccactcaagaaccagacagtctaaatctaggtccatcacaaggaacagg
cgttcaagatctagatcacccagacgaatcaagcgatctcgttccagatgcataataaga
aacagacgttcaaaatctaggtcacccaggagaaacaggcggtctaaatctaagtcacct
tggcgaagcaggcgctcaagatctagatcccccaggagaaacaggcactcaaaatctaga
tcccccaggagaaacaggcactcaaaatctagatcccccaggagaaacaggcactcaaaa
tctagatcccccaggagaaacaggcactcaaaatctagatctccagcaagacgcatgagg
aggagtagagctaaatcaaaatcacagagacgaaataagcgatcaaagtctagatcccta
agcagacataggaggtctaaatctaaatcacccaaacaaaaaagacactcaaaatctaag
tctcccaaaagaaacaagtgttcaaaatcaaagtctcctacaagaaacaagctctccaaa
tctagatacccctcaaaggacaacagatcagaatctagatccccctcaaaggacaagatg
tcaaaatctggatccccctcaaaggacaagatgccacaatctagatccccctcaaaggac
aagatgccacaatctagatccccctcaaaggacaagatgtctaaatctagatccccctca
aaggacaagatgtctaaatctagatccccctcaaaggacaagatgtctaaatctagatcc
ccctcaaaggacaagatgtctaaatctagatccccctcaaaggacagtagatcagaatct
agatccccctcaaaggacaaaagatcaaaatctagatccccctcaaatgacgagagatcc
aaatctggatcaccctccaaagaccagagatcccagtctagatcaccctccaaagaccag
agatcccagtctagatcaccctccaaagaccagagatcccagtctagatcaccctccaaa
gaccagagatccaaatctagattgccatcagaacatgagagatccaaatctagatcgccc
tcagatcacgagagatccaaatctaggtcgccctcaaaacacgagagatcccaatctaga
tcgccctcaaaagacaagagatcccaatctagatccccagaaagaagcaagctctcagga
agtaaatcgccaaccaaagagttcacaaagtataaatctggatcccctgccaaagaccag
tgctccaaatctataaccccattaaatgtagaaatatctacttcccccaaaccagaaacg
gcattgggaccagtgtatccaacaacagatatatctacaggacctctctgtgcaatgatg
gaagaagattcaatgccacagtcttttgcggcagacagattttcaaagtctggatctccc
attaaagttgattggtcagaattagaatttccactgaccaattcaccttctcttgtgaac
agagaatgcatagaagtttcttcactgattaaagacacagagtctaatattatgacagac
gctacatggacagcattgtcccctatgacagcaaactgtttaacaactgaaagcaccaca
acagatgagcatccagtaagatcggcatatccctcagtagatagtagttacaataccagt
tctttgttgagggaaaagtccccaccatctgtatcctcagagttttctgaaagtgggtct
ccaaaaccacagcagtgctcaagatcggaaataacagaaaaggacttcactcttaaatca
cctccatctatagacagacctttaacatccactttgacccacacttgtgatcagaaacct
gaatttcccatgtcggacaagtgctttaaattagaatcctccaagtcagacggtaactca
caatccaaatcgccagcaacacagagtaatttgagatctacatcaccagtaaatgacgag
tcctctaaatctaggtctcctgtatcagatcggtgttcaaagtctgaatcccctacaagg
gaagatacttcagcatcaactgctgacagacaatctgagtctaaacctacagtggcagac
atttttacagggtgtagtactccttgtataagtcaacctcatagttcttgcccccctaca
gcagagatgccttcagaatctttatccccaactcgagacacttgttctcgatctctatct
ccggcattggaggattttccaacatctttgcccgagacggatggatgtccaaaatctccc
attagagaaaagcattcagaatccccagggctagaacagagctcacaatctaagtctcct
gcagaaagtgcatgtactaaacctgaagtacctacaaaaattgatcgttcaaaatctcgg
tctcctccgacaaacactaagtcctccactagaaacaagagttcaaaatctagatccccc
tcagtaaagaaacactcaaagtcctccaagcagaagaactgttccaggtctggatctcct
gctaaaaagtcaaagtctccatcaaggaggaagagatctagatccccagtgagaaagaag
cgttccagatctagatcttccagtcagaagaggaggtctaaatcgagatcacctgcaaga
aagagatcaaaatctagatcccccataagaagaaagaggtctaggtccgatacaagaagg
aagcgatcaaaatccagatcccctaaaagaaggcgatcaaaatcgagatcgccttttaga
aagaagcggtcgaaatccaggtcccgtggaaggaacagacgttcaaaatcgagatcgcct
gcaagaagaaaaaggtcaagatctaaatcccctgcaaagaagcgctcaagatcagccact
cgagcaagacgctcaaggtccaagcacagatcaaggactcgctccatctcaagaccccga
agaaaatcgcgctcagtgtctcgagacaggaggtctcgctctgcagagaggaggaggaga
accaggtatcggagcaggtccattgagcgctggaggaggtccaggtccttcaacaggagg
agggtctccaggtctccggtgttgctgctgaggaggagaaggtcaatatccaggacccgg
aggagccccagcaagacccctccacgcctcacagagctggataaggcccagctgctggag
atagcgaaagctaacgctgctgccatgtgtgccaaggctggtgtgcccataccccagagc
ctgaaacctactgtcataatgcagctgccgttaccactgccaatccccctgcctgttgag
gagaagaagaaggttgtccagaaagtgaccaacagcaccattctggagctcacagagaag
tgcaagcagatcgcagagagcaaggaggacgagaatgaggtgttgaacaagccgcacgtg
tctgatgatgaagaggaggagcagcccttcggaggccagggtgccaggctgggagagctc
aagggcatttccttcagtctcagtaacccctcagtgaaaacggctgccaggacagaggtg
gcactgaccaaggacttcccagtgtcctcgggctcgcagcacaggaagaaagagggagac
ggtgcctatggggagtgggttcttgtcgacaagggggccgagaaggaaagcaaggacgac
gtcttcacagacacacctgtgcagcctgtggacatcacactggcaatgaacgagagagcc
gtggcacagaagaagctggcagaaaaccccttcgatatcaacgccatttgtatgctgagt
cgagcacaggagcaggtggacgcgtgggcccagtccagcaacctgccgggccgcttcaca
gggagcaccggcgcccaggtcctgtctgcagaagagctctcctccagtggaccccaagcc
tggatacgaaaggaccagttcctgcgggcagccccagtggctggaggagtgggcgagttc
ctcatgaggaagatgggctggcgagagggggaaggactcggcaagtacagggaggggaac
acggagcccatcctgatagacttcaaaaccgaccgcaaaggtttggttgctgagggggag
aagactcaaaagtctgttaacttaaccgtcatgaaggatctgttagggaagcacccaatc
tcagcactgatggagctctgcaacaagaggaagtggtcacccccggagttcgttctggtt
catgacaacggccctgaccatcgcaagaacttcctgttcaaggtgatgttgaacggaagt
gagtaccagcccagcaaggcaagtcccaccaagaagcttgccagggccatggcggccact
gtggctctgcaggccatgggcgagttgtccaaagagggcatgggaaatggaccgaccttc
acttctgccagcagttaa
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