Polyodon spathula (Mississippi paddlefish): 121327775
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Entry
121327775 CDS
T07273
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K24993
paraspeckle component 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121327775
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121327775
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121327775
NCBI-ProteinID:
XP_041127907
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All DBs
Position
15:6432819..6490477
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AA seq
506 aa
AA seq
DB search
MASRNLKQVKIHNSSSPPGIKSQKRESDSPDEQDQAMPAASRGEPGAGDPVEVGLTLDLK
NFKRPGEKTFTQRCRLYVGNLPNDLTEDDFKKLFAKYGEANEVFINRDRGFGFIRLETRT
LAEIAKAALDGTVVKNRPLRIRFATHGAALTVRNLSPVVSNELLEQAFSQFGPVERAIVV
VDDRGRPTGKGFVEFASKPAARKAMDRCAEGAYLLTTSPRPAVVEPMEQFDDEDGLPEKL
MQKTQQYHKEREQPPRFAQPGTFEFEYSSRWKALDDMEKQQRDQVDRNIREAKEKLEAEM
EAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIEMRHEEERRRREEEMMRQRD
GFKSNFMENREQEMRMGDMGPRGTINMGDTYSPVAAGNQGPPQMMGMNMNNRGAMSGTAV
GPGPAMGPEGAPNMGAPMMPDNGTMHNDRFPQAGPPQMGSPLVGRPGVEAPQTPMASAGA
VGGGPGGFGRGNQGGNFEGPNKRRRY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctagccgaaatctcaaacaggtcaaaatccacaacagctcctcgcctccaggaatt
aagagtcagaagcgcgagtccgattcgccagatgagcaggaccaggcaatgcccgcggct
tcgaggggagagccgggcgccggcgaccccgtggaggtagggttaaccctggacctgaag
aacttcaagaggcccggcgagaagacattcacccagcgctgccggctctacgtcggtaac
ctaccaaatgacctgactgaggacgatttcaagaagttattcgcaaaatacggtgaagca
aacgaggtgtttatcaatcgtgaccgtggctttggcttcattcggctggaaacgaggact
ttggctgaaattgcaaaagcagcactagatggaactgtagtaaaaaacagaccgctccgt
attcgattcgctacccatggtgctgctttgactgtccggaatctgtcgccagtcgtttcc
aatgagctgcttgaacaggccttttctcagtttggtcctgtggagcgagcaattgtcgtg
gtagatgaccgtggaaggccaactgggaaagggtttgtagaatttgcatctaaacctgca
gctcgaaaagccatggatagatgtgcagagggagcatacttgcttacaacatcgccccgt
cctgcagttgttgagccaatggagcaatttgatgatgaagatggacttccagaaaaatta
atgcagaaaacacaacagtatcataaggaaagagagcagcccccacgttttgctcagcct
ggtacatttgagtttgaatattcgtctcgatggaaggcccttgatgacatggaaaagcaa
cagcgtgatcaggttgacagaaatatccgagaagcgaaagagaaacttgaagctgaaatg
gaagctgctcgtcatgaacatcagctcatgctaatgagacaagatcttatgaggcgtcag
gaagagctaaggcgtttggaagaactgcgaaaccaagaacttcagaagcgcaagcagatt
gaaatgagacatgaggaagaacgaagacgacgtgaagaagaaatgatgcggcagagagat
ggcttcaagtccaattttatggagaacagagaacaggaaatgagaatgggtgatatgggt
ccccgaggaacaattaatatgggagatacgtatagcccagtagctgctggtaaccaaggc
cctcctcaaatgatgggtatgaatatgaacaacagaggagcaatgtctggcactgctgtg
ggacctggtcctgccatggggccagaaggagcaccaaacatgggagcaccaatgatgcca
gataacggaacaatgcacaatgatagattcccgcaagctggtccaccacagatgggctcc
cctttggttggcaggcctggtgttgaagctccacaaacaccaatggctagtgcaggggct
gtgggtggtggacctggtggttttgggagaggaaaccaaggggggaactttgaaggacct
aataagcgtcgtagatactga
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