Polyodon spathula (Mississippi paddlefish): 121327812
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Entry
121327812 CDS
T07273
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121327812
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121327812
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_14
SNAP
TPR_2
TPR_7
TPR_12
Motif
Other DBs
NCBI-GeneID:
121327812
NCBI-ProteinID:
XP_041127954
LinkDB
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Position
15:31743896..31886433
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AA seq
1260 aa
AA seq
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MEPPEEKPIIYTMENKPIVTCAGDQNLFTSLYHSLAQQLSREPMEWRRSYGRPPKMIHLE
ANFVQFKEDLLPKEDNKALLTFPFLHIYWTDCCDTEIYKATVKEDIIRWQNLLKTYNTVD
WLIVVVESDTKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSPRSQESWSAF
LTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVVNFGAGDGANWLTSFCQPVHSWNGLLLRKPIDMEKRDLIQKSKAT
LLDMRSYLFSRQCTLLLFLQRPWEVTQRALELLHSCVQELNLLEVLVLQGALDCWVFLSC
LEVLQRIESCSDWAQLDSNASHTVGLWTYATEKLKALGYLCGLASENGPNSEDLNRTVDL
LAGLGAERPETASSLQSPYKKLKEALSSVEAFEKHYLELSHATMDMYKTIGRLRSARLVG
KSLAEFYMRKGDPQKAEGFLQEALKTYMTEGWALPVTHTRKQLAECQKQLGQMENYLQTS
SLLASDFNLPEEERKHFCQEILNFANQQTYNQVQKVVLGMSSFAQLRQLHFKPCSAVVHV
GGSLTIELSLHSHMPVPVWVGQVAASVHFSNEKNCFHNAVESLSKQRVMAGGNNGIIHIQ
TDPPAGHSPRVSLPSLELYEMHDKSPSDNSLNSTGVICKNVHLLLRHQESVSSIETPSGV
SLEDSAQVLKTTDVLLEPGFNKIVFTAPTHEPGMYTLRQLCATVGSVQFVLPHIYPIVQY
DVYSQEPQLKVEPLTDSLLAGIAQKLKFTIITGHYAIKKGDVLQLSNVDAMHILYSPGNT
ATILSNTGEKVEESVLMIQSSEKVTSIMLPLTPAYHVIEFELEVICHILSTLSKPFDNER
LTNGELHWKTKENEKPDSCQASIAQKMSIDCPWSIYSTIIALTFYNPFKAAQSLLSAGKR
KYIQVCLQNMSEVSFHLLDHNLTESLKCPNIELVSMNVKTRQHVYRKQSVFCLWEIKWTK
ELPSSLQCQFSVNFSPAISEEESTSFKPYVYEFQLENIVTLYNVKAEIYPVLGAEHCRTG
SLCSLEVSITRLSDLTEADQDESLTESDGLCTTKLMYEVVDNSSNWALCGKSSGVISMPV
AARALHKVHMEVMPLFAGNLPFPNVKVSKYLPHHSSHSTQPDIDSWLENDLSVDKALDEQ
ADSSSIRSRTSTHSASNEHKGLSMPRLQSFSPGQVFSCSTGMQVLVVPSKDDHVLEVNVT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggagccccctgaagaaaagccaataatatacacaatggagaacaaaccgattgtaacg
tgtgctggggatcagaatttgtttacttccctctaccactcactggcacagcagctttca
cgggagccgatggaatggaggaggtcttatggacgtccaccaaagatgattcacctggag
gccaactttgtccagtttaaagaagacctgttacccaaggaagacaataaggcacttcta
actttcccttttctgcatatatactggacagattgctgtgatacagagatttacaaggca
acagtgaaggaggacatcatcagatggcagaatttgttaaagacatacaacacagttgac
tggctgattgtggtggtggagagtgataccaaaaagaagaataaaaccaacattcttccc
cggacatctatagtggataaaataaggaatgacttttgcaataaacagagtgacagatgt
gtggttctatctgatcctttgaaagactctccccgctctcaggaatcctggagtgcattc
ctaacaaaactcaggacgctgctactcatgtcctttactaagaacctgggcaaatttgaa
gatgacatgcgaacactgcgggaaaaacggactgagccaggctggagcttctgtgaatac
ttcatggtccaggaagagctagcgtttgtgtttgagatgctgcaacaatttgaagatgcc
ctggtgcagtatgatgaattggatgctctgtttacacaatacgtcgttaattttggtgct
ggagacggagccaactggctgacttctttctgccagccggtgcacagctggaatggtctg
ttgctacgcaagcctatcgatatggagaagagggacctgatccagaaaagcaaggccacc
ttgctggacatgcgcagctacttgttctcacggcagtgcaccctgctccttttcctgcag
cgcccctgggaggtcacccagcgtgccctggagctgctccacagctgtgtccaggagctc
aatctattagaggttttggtgctgcagggagctctggattgttgggtcttcttgagctgc
ctggaagtgctgcagagaatagaaagctgttctgattgggcacaattagattcaaacgca
tcacatacagtcggtctctggacttatgctactgaaaagttaaaggccttgggttatctg
tgtgggctggcatcagaaaacggacccaattctgaagacttaaacagaacagtggatctc
ctggctggactgggagcagaacgaccagaaactgctagcagtctgcaaagcccttataaa
aaactcaaagaagccttatcttcagtagaagcctttgaaaaacactacttagaactctcc
catgctactatggatatgtacaaaacaattggtcgacttcgatcagctcgacttgtagga
aaaagcctggctgagttttacatgagaaaaggggatcctcagaaagctgaaggcttcctt
caagaggccctcaaaacctatatgactgagggctgggctctgcccgtaacccacaccagg
aagcagttagctgagtgtcagaagcagcttgggcagatggaaaattatcttcagacaagt
agccttttagccagtgatttcaatctcccagaagaggagaggaaacacttctgtcaggag
atcctgaattttgctaaccagcaaacttataaccaagtacaaaaggtggttttggggatg
agctcatttgcacaactaaggcagctgcacttcaaaccttgctcagccgtggtccacgta
ggtggctccttgaccattgagctgagcctacacagccacatgccagtccctgtgtgggtg
gggcaagtggcagccagcgtgcacttcagcaatgagaaaaactgcttccacaatgcagta
gagtccctgagcaaacagcgggtaatggcaggtgggaacaatggcattattcacattcaa
accgaccctcctgctgggcactctccacgagtcagtttgccctcactggagctgtacgag
atgcatgacaagagcccctctgacaactcgctcaactccaccggcgtcatctgcaagaat
gtgcacctgctgctgcgccaccaggagagtgtttcctccatagagacgccatctggagtt
tcactggaagacagcgcacaggtcctcaaaacaactgatgtattgctagagccaggtttt
aacaagatagtatttactgcgccgacccacgagccagggatgtacacccttcgtcagctg
tgtgcaacagtgggaagcgtgcagtttgttctcccccacatctaccccattgtgcagtat
gatgtctattctcaagagccccaactcaaggttgagccactgacagacagtcttttggca
gggattgcccaaaaactgaagtttacaataattactgggcactatgcaataaagaaaggg
gatgtactacagctaagcaatgttgatgccatgcatatcctgtattctcctgggaatact
gcaacaatattgtccaacacgggagaaaaagttgaggaaagtgtattgatgatccagtca
tccgagaaggttaccagcattatgttgccacttactcctgcttatcatgtcattgaattt
gaactggaagtaatttgccacatcctctccaccctctcaaaaccatttgacaatgagagg
ctgaccaatggagagctccattggaaaaccaaagagaatgagaagccagactcctgccag
gcctccatcgctcaaaagatgtctattgactgcccatggtctatttattctacaattatt
gccttgacgttctacaacccctttaaagctgcgcaatccttgctatctgctggaaagagg
aaatacatacaggtgtgcctgcagaatatgtcagaagtgagctttcatctgttagaccac
aacctgacagaaagcttgaagtgcccaaacattgagctggtgtctatgaatgttaaaact
cgccagcatgtctacagaaagcagtcagtattctgcctgtgggaaattaagtggaccaaa
gaacttccttccagtctgcagtgtcagttttctgtcaacttctctcctgcaatcagtgaa
gaggaatccacctcttttaaaccctatgtctatgaatttcagttggaaaacattgttaca
ctgtataatgtaaaagcagagatctacccagtgctgggagcagaacactgcagaactggc
tccctctgctctctagaagtttccatcacacggctttctgacctcacagaagcagatcag
gatgaatctctgacagaatctgatgggctgtgcacaaccaagctcatgtacgaagtggtg
gacaacagcagtaactgggcattgtgtggaaagagctcgggggtcatctctatgcctgtg
gcagctcgggccttgcacaaggtccacatggaggtgatgccactgtttgctggaaacctg
cctttccccaatgtgaaggtctccaagtaccttcctcaccactcatcccactccacacaa
cctgacattgacagctggcttgagaatgacctttcagttgacaaggcactggacgaacag
gcagacagcagtagcatccgaagccgaaccagcacgcactccgccagcaatgaacacaaa
gggttgtccatgccccgcctgcaatcattcagccctggccaggtcttcagctgcagcact
ggcatgcaagtccttgttgttcccagcaaggacgaccacgtcctggaagttaacgttaca
tga
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