Polyodon spathula (Mississippi paddlefish): 121327814
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Entry
121327814 CDS
T07273
Name
(RefSeq) dystrophin-like isoform X1
KO
K10366
dystrophin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121327814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121327814
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121327814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_2
Spectrin
EF-hand_3
ZZ
Motif
Other DBs
NCBI-GeneID:
121327814
NCBI-ProteinID:
XP_041127958
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All DBs
Position
15:complement(10275042..10497917)
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AA seq
1281 aa
AA seq
DB search
MPSSLLMEVPAMADFNKAWAELTDWLSLLHHVIKTQIVTVGDLEEINDMIVKQKATLQDL
EQRRPQLEDLITAAQNLKNKTSNQEARAAITDRIDKIQVQWEEVQGRLQNRRQQLQEMQK
DSSQWLEAKQEAEQVLERAKAKLESWKEISYTVEALKKQNADLKQFVKELRQWQINIDVA
NDLARKMLRDYSADDTRKVDLMTESMNKSWASINKKVGEREAALEAALRLLQQFYLDLEK
FLGWLTEAEMTANVLQDATHKEGLLDDAHVVRELVKQWQDLQAEIEAHTEVFHSLDENGQ
KILKSLEGSEDATLLHRRLDNMNVRWSELRKKSISIRSYLEASTEQWKRLHLSLQELLAW
LQLKNEELTRQKPIGGDVPTVQKQLDTHRAFKRELKAKEPVILNTLETVQVFLAEQPVEG
LQRLYQEPRELSAGERAQNISRILRKESDDVKTEWERLNGRCADWQKKLDEDLERLLELQ
EAMDELDLKLHQAEMVKQGWQPVGDLLIDSLQDHIEKLKAFRDEIAPIKENVTHVNDLAS
KFTPADIQLSHYNLNRLEDLNTRWKLLQVSKETSRNSGQMKEGGEISKVSIEERLKQLHE
AHRDFGPTSQHFLSTSVQGPWERAISPNKVPYYIKKEKGKRPLTHTRTEEKESHQTQTTC
WDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLGLLAACEAFDQHNLKQNE
QLMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGKIRVLSFKTG
MVSLCKAHLEDKYRYLFKQVASSTSFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS
VRSCFQFANNKPEIEAAMFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPII
GFRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAKVLKNKFRT
KRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDYAPASSPQLSHDDTHSRIEHYAS
RLAEMENRNGSYLNDSISPNESIDDEHLLIQHYCQSLNQESPLSQPRSPAQILMSLESEE
RGELERVLNDLEEENRNLQSEYDRLKEAHDHKGLSPLPSPPEVMPISPQSPRDAELIAEA
KLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQADAKVNGTTVSSPSTSSQRSD
SSQPMLLRVVGSQTTETMGDDNLLSPPQDASTGLEEVMEQLNNSFPTTRGNNVGSLFHMA
DDLGRAMESLVTVMTDDEGLD
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtccctactgatggaagtgccagccatggccgacttcaataaagcctgggct
gagctcacagactggctctccctgttgcatcatgtaatcaaaacccagatagtgacggtc
ggagaccttgaagaaatcaatgacatgattgtcaaacagaaggccactctgcaggaccta
gagcagaggcgtcctcagctggaagatctgattactgcagcacagaacctgaagaacaag
accagcaatcaggaggctcgagccgccatcactgaccgcatagataagatccaagtccag
tgggaggaagtacagggccggctccagaaccgaaggcagcagctacaggagatgcagaag
gactcaagtcagtggcttgaagcgaaacaggaggccgaacaggtgctggagagggccaaa
gccaagttggagtcatggaaggaaatatcttatacagttgaggcactgaagaagcagaat
gcagatctaaagcaatttgtgaaggagctccggcagtggcagattaacatagatgtggca
aacgaccttgcgcgcaagatgctgcgggattactctgccgacgacaccaggaaagttgat
ctgatgacagagagcatgaacaagtcctgggcaagcattaataagaaggtgggggagagg
gaggcagcgttggaagcagccctcaggctcctgcagcagttctacctggatctggagaag
ttccttggctggttgacggaagccgagatgacggccaatgttctccaagatgccacccac
aaggagggtttgctggatgatgcccatgtggttcgagagcttgtgaagcagtggcaggac
ctgcaggcagagatcgaggcccacactgaggtgttccacagcctggatgagaatgggcag
aagatcctgaagtctctggagggctcagaagatgccacgctgctgcatcgacggctggac
aacatgaacgtcagatggagcgagctgcgtaagaagtccatcagcatcaggtcctatcta
gaggccagcaccgagcagtggaagcgtttacacctgtctctccaggaactgcttgcttgg
ctccagttaaagaatgaggaactgaccagacagaagcccattgggggtgatgttcctacc
gtccaaaagcagctggatacacacagggctttcaagagggaactgaaagctaaagaacca
gttatcttgaacactctagagacggtgcaggtgttcttggcagagcagccggtcgaaggg
ctgcaaaggctttatcaggaaccaagagagctgtcggctggggaacgggcccagaacatc
tcccgaatccttcgcaaggagtcagatgacgtgaaaacggagtgggagcgtctgaatggg
cgctgtgcagactggcagaaaaagctggatgaagacttggagaggctgctggagctgcaa
gaggccatggatgagctggaccttaaactgcaccaggctgagatggtcaagcagggctgg
caacccgtgggggatcttctcattgattccttgcaggaccatatagagaaactaaaggcc
ttccgagatgaaatagctccgattaaagagaatgtaacccatgtgaatgacctggcttcc
aagttcactcctgcagacatccagctctcccattacaaccttaaccgtctggaggatctg
aacacacgctggaagctcctgcaggtttccaaggaaacctccagaaactcagggcaaatg
aaggagggaggggagatctccaaggtgtccattgaggagcgcctaaaacagctgcatgaa
gcccacagggactttggcccaacatcacagcacttcctctccacttctgtccagggtccc
tgggagcgggcaatatcaccaaacaaagtgccgtactacattaaaaaagaaaaaggaaaa
aggcctctgacacacacacggacagaagaaaaagaaagccaccagacccagacaacatgc
tgggatcatcccaagatgactgaactctaccagtctttagctgacctgaacaatgtcagg
ttctctgcgtacagaaccgccatgaagcttcgaaggctgcagaaagccctgtgcttggat
ctcttgggcctgttggcagcgtgtgaggcatttgaccagcacaacctcaaacagaacgag
cagctcatggacatcctccagatcattaactgcttgaccacaatctatgaccggctagag
caggagcacaacaacctggtcaatgtgccactctgtgtggacatgtgcctcaactggctg
ctcaacgtttatgacacgggcagaacagggaagattcgtgttctgtcattcaaaaccggc
atggtttcactctgtaaagcacatttggaggacaagtacagatacttgttcaagcaggtg
gccagctccacaagtttctgcgaccagcgaagactaggcctcctcttgcacgactccatc
cagattccacggcagctgggagaggtggcttcctttggcggcagcaacattgaacccagc
gtcaggagctgcttccagtttgccaataacaaaccagaaattgaagctgctatgttcctc
gactggatgaggctggagccccagtccatggtctggttgcctgtgttacaccgagtagca
gcagccgagacagccaaacaccaggccaagtgcaacatttgcaaggagtgtccaattatt
ggattcaggtaccgaagtttaaagcactttaactatgacatctgccaaagctgcttcttt
tctgggcgtgttgccaaaggtcataaaatgcagtaccccatggttgaatattgcacaccg
acaacttcaggagaagatgtgagagactttgccaaggtgttgaaaaacaagttcagaaca
aagcgatattttgcgaagcacccccggatgggatacttgccagtacagacggtgctggag
ggagacaacatggaaactcctgttactctgatcaacttctggccagtagattatgcccct
gcctcttcaccacaactgtcacacgatgatacgcattcacgaattgagcattatgctagc
aggctagcagaaatggagaaccgtaatggatcttatctcaatgacagcatctcacccaac
gaaagcattgatgatgaacatttgctaatccagcactactgccaaagtttgaaccaggag
tctccactgagccagcctcgcagcccggcccaaatcctcatgtccctggaaagcgaggag
agaggagagcttgagagggtcctgaatgacctggaagaagaaaacagaaatctccagtcc
gagtatgaccgattgaaagaggcgcacgatcacaaggggctatcccccctgccttcacca
cctgaggtgatgcctatctccccccagagcccccgagatgccgagctcattgcagaagcc
aaactgctccgccagcataagggtcgcctggaggccaggatgcagatcctggaggatcat
aacaagcagcttgagtcccagctgcacaggttgagacagctgctggagcagccccaggca
gatgccaaggtcaatggtactacagtctcctctccttctacctcctcccagcgatcggac
agcagtcagccgatgctgctccgtgtggttggcagccagactacagaaaccatgggtgat
gacaaccttttgagcccgccccaggacgcaagcacaggtctcgaggaggtgatggagcag
ctcaacaactctttccccacaaccagaggtaacaatgtaggaagcctctttcacatggca
gatgatttgggccgagcaatggagtccttggtgacagtaatgacagacgacgaggggttg
gattaa
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