Polyodon spathula (Mississippi paddlefish): 121327827
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Entry
121327827 CDS
T07273
Name
(RefSeq) integrator complex subunit 6-like isoform X1
KO
K13143
integrator complex subunit 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121327827
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121327827
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
121327827
NCBI-ProteinID:
XP_041127987
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Position
15:10107488..10137237
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AA seq
912 aa
AA seq
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MPVLLFLIDTSASMNQRAHLGTTYLDIAKGAVETFMKLRSRDPASRGDRYMLVTFEEFPS
GVKAGWKENHATFMHELKNLQAVGLTTVGQSLRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSIIVTITDGSKLTSSSGIQDELHLPLSTPLPGSELTKEPFRWDQRLFALVLRIPGNMA
VEPEQMMGVPQDDSAITPMCEVTGGRSYSVCSQRMLNQCLESLVQKIQSGVVINFEKTGP
VPPPIEDGPPDASKPVPQVWHSCHKLIYVRPNPKTGVPIGHWPIPEAFWPDQNSPTLVGV
YPSRTAHPQVRFSCIDSEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVCNSAK
YSDLGQPFGYLKASTALNCVNMFVMPYDFPVLLPLLDDLFKVHKLKPTLTWRQSFEVYLK
TMPPYYIGPLKKALRMMGAPNLIAENMEYGLSYSVVSYLKKLSQQAKVESDRVIALIGKK
PVQENGVQLKNKAGTLSLAHCKDFKQLLKGITGEAPHVLQELNMKEFTGFQIGILNKDLK
PQSFRNAYDIPRRSLLDHLSRMRSNLLKATQGLLKGQDEDQLHSIPIAQMGNYQEFLKLS
PSSPLREVDPDQPKRLHTFGNPFKLDKKGMMIDEADEFVSGPQNKSKRPGDPSMQGVPKR
RRCMSPLLRGGRPLTPPAVNNHIGGKGSPSIPVTLAHPNLVKPIPVCKVQTCVNNEVQMK
RIWHAATPEENPNAFTDCVIENHIGSHNSLETLPDPVPDLNSDTDPFSMKQLPAGTENHI
GELGNSRSGVDDIYTVSPTGTHEDSEEGGACLEEGLHQSRKMKKLNHSKSEENNTELKVL
ITREIRKPGRRYERIFYFLEQVQGSLHTRLLFLQNVIKEAARFKKRVLIEQLEGFLEEIH
CRYNRMNHVDSI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttttacttttcctgatagacacgtccgcttctatgaaccagcgcgcccatctg
ggcactacctacctggacatagctaaaggggcagttgagacttttatgaagcttaggtcc
cgagatccggcgagcagaggagacaggtatatgctggtgacttttgaggagttccctagt
ggagtcaaggctggatggaaagaaaaccatgccacatttatgcatgaattgaaaaatctc
caggctgtaggacttacaactgttggccaatccctaaggacagcttttgacttattaaat
ctaaatagattagtttctggaatagacaactatgggcagggaagaaatccttttttcttg
gagccgtcaattattgtcacaatcacagatgggagcaagctgaccagtagcagtggaatt
caggatgagctccatttacccctcagcacccctttacctggaagtgaactgaccaaggaa
cctttccgctgggatcagcgcctgtttgctctcgtcttaaggatccccggcaacatggct
gttgagccagagcaaatgatgggtgttcctcaggacgattctgccattactccaatgtgt
gaggtcacgggaggtcgttcgtacagcgtctgttcacagaggatgctcaatcagtgtctg
gagtcgctggtgcaaaaaatccagagcggtgtggtaataaactttgagaaaacaggacca
gtcccgccacctatagaagatggaccacccgacgcatccaaacctgtaccccaggtttgg
cacagctgtcacaaactcatctatgtccgacccaatcccaaaacaggggttcctattggc
cactggccaatcccggaggcattctggcctgatcagaactcgccaacacttgtaggtgtc
tatccatcccgtactgcccatcctcaggtccgcttttcctgtatcgactcggagcccatg
gtaatagacaagcttcccttcgataaatacgagcttgaaccatcgcctcttacgcagtac
atcctggagaggaaatcgcctcatacatgttggcaggtttttgtctgcaatagtgcaaag
tacagtgaccttggccagccgtttggttatttgaaagccagtacagctttgaactgtgtt
aacatgtttgtgatgccatatgacttccctgtactccttcctcttctggatgatttgttc
aaagttcacaagctaaagccaactttaacgtggaggcagtcattcgaagtatatttaaag
actatgccaccatattatattgggcctctgaagaaagctctccggatgatgggagcgcct
aatctaattgcagaaaacatggagtatggtttaagttacagtgttgtttcatatctcaaa
aagctaagccagcaggcaaaggtggagtctgatcgagtcattgcgttgataggtaagaaa
ccggttcaggagaatggggtgcagttgaagaacaaggccggcacactgtcacttgcgcac
tgcaaagacttcaagcagcttctgaagggaatcaccggggaggctcctcatgtcctacag
gagctcaatatgaaggaattcactggattccagatcggcatcctgaataaggatttgaag
cctcagagtttcagaaatgcatatgacatacccagaagaagtctgttggatcacttgtca
agaatgagatccaaccttttaaaagctactcaaggactactgaagggacaagatgaagat
caattgcacagcattcctatagcacagatgggaaattaccaagagttcctgaagctgtcg
ccttcttctcccttgcgagaggtcgaccctgaccagccaaaacgactgcacacgttcgga
aaccccttcaaactggacaagaagggaatgatgattgacgaagcagacgagtttgtctca
ggtccccagaacaagagcaagagaccgggagaccccagcatgcaaggggtgccaaaaagg
agaaggtgcatgtctccactgttgagagggggccggcccctcactccaccagctgtcaat
aaccacatagggggaaagggctccccatccattcctgtaacactggcacatccaaacctt
gtaaaacctattcctgtctgtaaagtacagacatgcgtcaacaacgaagttcagatgaaa
cgtatatggcacgctgcaactcctgaagaaaaccctaatgcgttcacagactgtgtgatt
gaaaaccacataggaagccataactcacttgaaactttaccagaccctgttccagacctg
aattcagacactgatcctttcagcatgaagcagcttccagcaggaacggagaaccacata
ggcgagctgggaaacagccgttcaggggtcgacgacatttacacagtgagccccacggga
acccatgaagacagcgaggaagggggggcgtgtctcgaggagggtctgcaccaatcacgc
aaaatgaaaaagctgaaccactccaagagtgaagaaaacaacacagagcttaaagtcctc
atcaccagagaaattagaaaaccaggcagaagatatgaaagaatattttatttcctggaa
caagtgcaaggcagtttacacacaagactgctgttcctacagaatgttatcaaagaagca
gcaaggtttaaaaagcgcgtgcttatagagcaactggaaggattcttggaagaaatccac
tgccgatacaatcggatgaaccacgtggatagcatataa
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