Polyodon spathula (Mississippi paddlefish): 121327833
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Entry
121327833 CDS
T07273
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121327833
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121327833
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121327833
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121327833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
121327833
NCBI-ProteinID:
XP_041128009
LinkDB
All DBs
Position
15:31443100..31514724
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AA seq
711 aa
AA seq
DB search
MAPMLQSPEIQFAQKLASNEKPIRTRALKKLRKYLSIRSQKPAGGFSNDELLKIWKGLFY
CMWMQDKPLMQEELAAVISRLIHSLQKTDAQYLFLETFLQTMNREWNGIDRLRLDKFYKL
IRMVLRQSFELLKRGSWDESLVERFGCILSTQVLSAASGAPSGIQFHILDIYMEELATVG
AEELTAEQNLKFIDPFCKIAAKTKDHLLMQAVAHSIFDEIVDQSPFAIEDLMKEVQQQGR
NVSDSENRDLSKSKKSIGRQLKGKEAEKKKQNLEDDSEGTIEMSEGDGEDIGPVLQFDYK
AIADRLFELASRTSTPPQNRKIMYRLVKKFQDLSDGIFPQDEYPEEVSTDEDDDELFGSR
KRMKKRRNTESLLEKSSEAAKEKDKKKKGGKKIKTLNGTVKQKKENTEASPAGTSTELKQ
PCATEESTETKAKKKKTKLKESSPKRIVADPSSNNIDGHTGEKRKKKTAKEAAAAILPSR
GKKMKRLRVLGVNGERPCLEQTTPLEEGRSPSELPKNTKKTVELVQVDPAAEQVESSQTK
KMMKKKKRKIEVANPAEVNGLREHGGKKKKKSCKAEETVNSVSSEKPLQKSKAITETEFV
RFENSSFPVPLFFKRANGGKPRAAKQGLQTPESGSKKVTFGLNNNKTAEFRRTDKSILVS
PAGTSRVAFDPQQKPLCGVLKSPLSVMCSRHKTNTPASTKKRATAADFFNF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgatgttgcaatctccagagatccagtttgcacagaaactagcttcgaacgaa
aaacctatccggacccgcgccttaaagaaactgaggaaatatctcagcatcagatcacag
aaaccagcaggtgggtttagtaatgatgaactgctcaagatatggaagggccttttctac
tgcatgtggatgcaagacaagcctctcatgcaagaagaattggcagctgttatttctcgg
ctgatacattccttgcagaagactgatgcccagtatttatttctagagaccttccttcag
accatgaatcgggaatggaatggcatagacagactgcgtcttgataaattttacaagctc
atccgaatggttttaaggcagtcttttgaactgctgaagaggggaagctgggatgagagc
ctagttgagcggtttgggtgtatactgagtacccaagtgctgagtgctgccagtggtgct
ccgtcaggaattcagttccatatcctggacatctacatggaggagttggctactgttgga
gcagaggagctcacagcagaacagaatttgaagttcattgatccattttgtaagattgct
gccaagacaaaagatcacctgctcatgcaggcagtagcacatagtatatttgatgagatt
gtggaccagtctccatttgccattgaagacttgatgaaagaggtgcagcaacagggacga
aatgtgtctgactcagaaaatcgagatctctccaagtcgaaaaagtcaatcggacggcaa
ctaaaaggtaaagaagctgaaaaaaaaaagcagaatttggaagatgactctgaaggtacc
attgaaatgtctgaaggtgatggtgaggatattgggcctgttcttcagtttgactacaag
gcaattgcggaccgtctctttgagctagctagccggaccagcacgcctccccagaacaga
aagatcatgtatagactggtcaaaaaattccaagacttaagtgatggaatctttccccag
gatgagtaccctgaggaggtgtccacagacgaggatgatgatgagttatttggaagtagg
aaaagaatgaaaaagagaaggaatacagaaagtctgctggagaaaagcagtgaggcagcc
aaagagaaagataaaaaaaagaaagggggaaaaaagataaagacactgaatggcacagta
aagcagaagaaagagaacacagaggcttctccagcagggacttctaccgaattgaaacaa
ccctgtgcaacagaagagtcaacagaaactaaggcaaagaagaaaaagacaaaattaaag
gagtccagtcccaagagaattgtggcagaccccagcagcaacaacatagacgggcataca
ggagagaaaaggaaaaagaagacagcaaaggaagctgcagctgccattctcccctccaga
ggcaaaaaaatgaaaaggttgcgagtcctgggagtgaacggagaaagaccatgtcttgag
caaaccactccactggaagaaggccgttccccctcagaattaccaaagaataccaagaag
acagttgagctggttcaggtggacccagcagcagagcaggtggaaagcagccagacaaaa
aagatgatgaaaaagaaaaaaagaaagattgaggtggctaaccctgcagaggtcaatggg
ctcagggaacatggtggcaagaaaaagaaaaagagctgtaaagcagaagagactgtcaac
tctgtgtcttccgagaagccactccaaaaatccaaggcaatcacagagacggagtttgtg
agatttgaaaattcctccttcccagtgccattatttttcaagcgtgccaatggtggcaag
cccagagcagccaaacaggggctgcagacaccagaatcgggttcaaagaaagtcaccttt
ggactgaacaacaacaagactgcagaattcagaaggactgacaaaagcatattagtgagt
ccagcgggaacatcgcgagtggcctttgacccccagcagaagcccctctgtggagtgctc
aagtctcccttgagcgtgatgtgttccaggcataaaaccaacacccctgcttcgaccaag
aaaagagcaaccgctgcagacttttttaacttttaa
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