Polyodon spathula (Mississippi paddlefish): 121327869
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Entry
121327869 CDS
T07273
Name
(RefSeq) roundabout homolog 2-like isoform X1
KO
K06754
roundabout, axon guidance receptor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121327869
04515 Cell adhesion molecules [BR:
pspa04515
]
121327869
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121327869
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
ROBO family
121327869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Pur_ac_phosph_N
Ig_5
DEC-1_C
Motif
Other DBs
NCBI-GeneID:
121327869
NCBI-ProteinID:
XP_041128088
LinkDB
All DBs
Position
15:complement(38222448..38488412)
Genome browser
AA seq
1584 aa
AA seq
DB search
MGLLLVILVSGLLFFQVNGSRLRQEDSPPRIVEHPSDLTVSKGEPATLNCKAEGRPTPTI
EWYKDGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSR
NASLEVALLRDDFRQNPMDVVVAAGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEDRIT
IRSGKLMISNTRKSDAGMYICVGTNMVGERDSETAQLTVFERPTFLRQPINQVVLEEELV
EFRCQVQGDPQPTVRWRKDDADLPRGRYDIKEDYMLRIKKASSSDQGTYTCIAENRVGKV
EAAATLTVRARPVAPPQFVVRPRDQIVAQGRTASFPCETTGNPQPAVFWQKEGSQNLLFP
NQPLQTNSRFSVSQSGDLTITTVQRSDAGYYICQALTVAGSILAKAQLEVTDVLNDRPPP
IIRQGPANQTLAVDSLALLKCQALGDPIPTISWLKDGLSLLGKDSRMSLQDRGSLQIKNI
RLSDSGIYTCVAASSSGETSWSAFLEVRESGGATVSKNHDVNELPGPPSKPQVTNVTKNS
VSLSWQTGMTGSSPITSYVIEAFSQSVSNSWQTVADHVKMTQFTVRGLRPNTIYLFMVRA
VNSQGLSDPSPITDPVRTQDISPPAQGVDHRHVQRELGEVIIRLHNPVVLTPTTIQVTWT
VDRQSQFIQGYRVMYRQTSGLSSPSSWQGTDVKVPTERSTVLSNLKKGIVYEIKVRPYFN
EFQGMDSESKSARTTEEAPSAPPQSVTVLTVGNHNSTSISISWDPPPPDHQNGIIQEYKI
WCLANETRFDVNKTVDAAIRSVVIGGLYSGIQYRVAVAASTSAGVGVKSEPHPIIIGNFK
DVIMSGAGSNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAV
QSFTFTPAVTFQRVDGGMMSNGSRPGLLNASDPSYPWLADSWPASSIPGTNGPNDLGNFS
RGDALPLVPSQGDKSGTMLSDGAIYSSIDFTTKASYNSPNQIPQATPYATTQILHSNSIH
ELAVDLPDPQWKASIQAKQDLTGLGYSLPDKTSCNNTLLFIPDYRLAEGLSNRMPHNQSQ
DFSTTSSQNSSERSGSLSGGKGGKKKKNKSGSKPQKTNGSNWTNVPLPPPPVHPLPGTEL
DHYGGDHQEGGYGNDGWGPPLPVQTYLHQGMEDELEEEDERVPTPPIRGVASSPAMSYGQ
QSTATLTPSPREEIQPMLQAHLDELTRAYQFDIAKQTWHMQGNPYPPQAPAPPLGYISST
LLSDLETDIPDDEDDEDEEEDEGYEIARPLRGIEHTPGSSMDNLDSSVTGSMVNGWGSAS
EEEHNLSSHRSSIGSSSDDSIFTNGSFAQALVAAADKAGFRFDGTSLTKKGKGYSSSQRP
RPSSPFSTDSNTSAALSQNQKARPTKKHKGGRLDQAPMPHRREGIADDLPPPPDPPPCQG
SRLHSGSGQRGMGMGGSAERKASSLERQHVSCLEEKKSSLERQTRMSLERQRQAQERVGS
TERSEDMRRLHQQAHGSEEALVPYSKPSFPSPGGHSSSGTSSSKGSTGPRKGEVTRGPHQ
RNTTDLPDLGYMGTNGQGEYSGEL
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgctactagtcattcttgtttctggattacttttttttcaagtgaacggatcc
cgccttcgtcaggaggattccccccctcggatagtggaacacccctctgacctcactgtc
tccaaaggagagcccgccactttgaactgcaaggcagaaggccggcctacccccaccatc
gagtggtataaggatggcgagcgggtggagacggacaaggatgatcctcgctcccaccgt
atgctgcttcccagcggctcactcttcttcctccgcatcgtacacggccgacgcagtaaa
ccggacgaggggagttacgtctgcgtagccaggaactatctgggggaagctgtgagccgt
aatgcatcgctggaggtggcattgttgcgggatgatttccgacagaaccccatggatgtt
gttgtggctgctggagaaccagcaattttggaatgccagcccccacgtggtcaccctgaa
ccaaccatttactggaaaaaagacaaagtgcgcattgatgataaagaagacaggatcaca
atcagaagtggaaagctgatgatctccaacaccagaaagagtgatgcaggcatgtacatc
tgcgtagggaccaacatggtgggagaaagagacagtgaaactgcacaactaacagtgttt
gagcggcctacgtttctgaggcaaccgattaaccaggtggtccttgaggaagagctggtg
gagtttcgatgtcaggtgcagggggacccgcagcccactgtgcgctggaggaaagatgac
gctgatctacccagaggacgctatgacattaaagaggattacatgcttcgcattaaaaag
gcttccagcagcgatcaaggtacctacacatgtattgctgagaaccgtgttggaaaagtg
gaagctgctgcaactcttacagtcagggctcgccctgttgctcctcctcagtttgtggtc
aggccaagagatcaaatcgttgcgcagggtcgaactgcatcctttccctgtgaaacaacg
ggaaaccctcagccagctgtcttttggcagaaagagggcagccagaatctactgttccca
aaccagcccctccagacaaacagtagattttcagtttcccagagtggagacctcacaatc
accactgttcaacgatcagatgctggatattacatctgccaggctcttactgttgctggc
agcatcttagcaaaggcccagctggaagtcactgatgtgttgaacgacaggcccccaccc
ataatccgccaaggaccagctaatcagactctagcagttgacagtttggctttgctaaag
tgccaagccttaggtgaccctattcctaccatcagctggttaaaggatggtttgagtctc
cttggaaaagactctaggatgtctctacaggaccgaggaagccttcaaatcaaaaacata
cggctctccgattctggcatctatacctgtgtggctgcaagttccagtggggaaacatct
tggagcgcttttcttgaagtgagagaatctggaggagctacagtgagcaagaatcatgat
gtcaatgagcttccaggacccccgtccaaaccacaggtcacgaacgtcacaaagaacagt
gtctcgttgtcttggcaaacaggcatgacaggcagttcacctatcacatcctatgtcatt
gaagcattcagccaatcagtgagtaacagttggcagacagttgctgatcacgtgaagatg
acccagttcactgtgagaggacttagaccaaacacaatctacctgttcatggtcagagcc
gtcaactcacaaggactcagtgacccaagtccaataacagatccagtacgaactcaagat
atcagtccaccagcacagggagtggatcacaggcatgtgcagagagagctgggggaggtg
attatacgactgcacaaccctgttgttcttacaccaacaaccattcaagttacttggacg
gtggaccggcaatctcagtttatccaaggctatcgagtgatgtaccggcagacttccggc
ctgtcctctccttccagctggcagggtactgatgtgaaagtaccaactgagaggagcact
gtgctgtccaacctcaagaaaggcattgtatacgagatcaaggttcggccatacttcaat
gaattccaggggatggacagtgagtccaagtccgctcgtacaactgaggaagccccgagt
gcccctcctcagtctgtcactgtcctgacggtagggaaccacaacagcacaagcatcagc
atctcctgggaccctccccctcctgaccaccagaatggaatcatccaggagtacaagatt
tggtgtcttgccaacgaaactcgatttgacgtcaacaagacagtggatgcagctattcgc
tctgtggttattggcgggctctactctgggatccagtatcgtgttgctgtggcagcaagc
accagtgctggagtgggagtcaagagcgagcctcatccaattattattgggaatttcaaa
gatgtcattatgagtggagctgggagcaacaacagcatcactgagcagatcacagatgtt
gtcaagcaacctgctttcattgcaggcattggaggagcttgctgggtcattctaatgggc
ttcagtatctggctgtactggcgcagaaagaaaagaaagggtctcagcaactatgcagtt
cagtccttcaccttcacccctgcagtaacctttcagcgagtggatggaggcatgatgagc
aatgggagccgcccaggattattaaatgcaagtgacccaagttacccttggctggctgat
tcttggcctgcttcaagtattcctggcaccaatgggcctaatgaccttggaaactttagt
cgcggagatgctctgccactggtgccaagccaaggggacaaatccggaactatgctctca
gacggagccatctatagcagtatcgactttaccactaaggccagctacaatagccccaat
cagattcctcaggccaccccttatgccaccacacagatcctgcactccaacagcatccac
gaacttgccgttgacctccctgaccctcagtggaaggcctcaatccaggccaagcaagac
ctgacaggattgggttactcgctgccagacaaaacgtcatgcaacaacaccctacttttc
attcctgactaccgattggctgaaggattatctaatagaatgccacacaaccagtcacaa
gatttcagcacgaccagctctcaaaacagctcagaaaggagtggcagtctctcaggtgga
aaaggaggtaagaaaaagaaaaacaaaagtggatccaaacctcagaagacaaatggatca
aactggacaaatgttcctcttccacctcccccagtacatccattgcctggtacagaactg
gaccactatggcggggaccatcaagaaggagggtatggtaatgatggctggggaccccct
cttccagtccagacgtacttgcatcaggggatggaggatgaactggaggaagaagatgaa
agagtgccaacacctccgatccgaggagtggcctcctctcccgccatgtcttatggacaa
cagtctaccgcaaccctcacaccctcgccacgagaggaaatacagcctatgcttcaggcc
catctggacgaactgacaagagcctaccagtttgatattgcaaaacaaacatggcatatg
caaggcaacccctatcctccccaggccccagctcctcctcttggatacatttccagtacc
ctgctctcagacctagagactgacattccagatgatgaagatgatgaagatgaagaagag
gatgaaggatatgaaattgccaggccacttaggggtatagaacataccccaggctctagt
atggacaatcttgacagctcagtgacaggttcaatggttaatggatggggttctgcttca
gaggaggaacataacttatctagccataggtctagcataggtagctcctctgacgactcc
atatttaccaatggcagctttgcccaggcgttggttgctgcagcagacaaagctggcttc
agatttgatgggacaagcttaaccaaaaaaggtaaaggctactcttcctctcagagacct
cggcccagcagtccgttttccacagacagcaacaccagtgcagctctcagccagaaccaa
aaggccaggccaacaaagaaacacaagggaggcagactggaccaggcacccatgcctcac
cgcagggaaggaatagcagacgacttgcctccacctccagacccccctccatgccaggga
tcccggctgcactcaggttcagggcagagaggaatgggcatgggcggctctgcagagagg
aaggccagctccctggagagacagcatgtctcctgcctggaggagaagaagagctccttg
gagcggcagaccaggatgtctctggaacggcagaggcaagctcaggagcgtgttggctcc
acggagcgcagtgaagacatgaggagactccaccagcaagcacatggatcagaagaggca
ctggtgccatacagcaagcccagcttcccatctccaggaggacacagttcttcaggaaca
tcctcttcaaaaggatcaactggaccaaggaaaggggaggtcacaagggggcctcaccaa
cgtaacaccacagacctcccagatctaggatacatgggaacaaatggccaaggagagtac
tctggtgaattatag
DBGET
integrated database retrieval system
