Polyodon spathula (Mississippi paddlefish): 121327873
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Entry
121327873 CDS
T07273
Name
(RefSeq) transcription factor Dp-1-like isoform X1
KO
K04683
transcription factor Dp-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
pspa04110
Cell cycle
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121327873
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121327873
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121327873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121327873
03036 Chromosome and associated proteins [BR:
pspa03036
]
121327873
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
121327873
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121327873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
121327873
NCBI-ProteinID:
XP_041128101
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Position
15:25218942..25254473
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AA seq
407 aa
AA seq
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MAKDAGLIEANGELKLFIDQNLSPSKGVLSLVAVHPTTLTMGKQLLPKTLGPSNVNITPH
MVISTPQRSAGTNAVLLGSPHTPNTQFITQSQVADSSPWSTGKRNKKGEKNGKGLRHFSM
KVCEKVQRKGTTSYNEVADELVAEFSTPDNHISPNDSHVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRKLERIKQKQSQLQELILQQIAFKNLVQRN
RQQEQQTSRPPPSNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
KRMGMACGLESGKCSPEDLKIARSLIPKALEPYLTEMAHGSINNVYVPGEASNGGRCHTG
SDNGAEGTVASSSNGSHYSGSRVETPVSYMEDDDEDEDDYDENDDED
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatgcaggcttaattgaagcaaatggagagctcaagctttttatagaccaa
aatcttagtcctagtaaaggtgtgttatcattagtggctgttcatccgacaactctaaca
atgggaaaacagctcctgccaaaaacacttggaccctccaacgttaacattacgccacac
atggtaatcagcaccccgcagagatccgcagggacgaatgcagtcctgcttggtagtcct
cacacaccaaatacacaattcatcacacagagccaggtggcagactcttccccctggtcc
acaggtaagcggaataagaaaggggagaagaatggcaaagggctgaggcatttctccatg
aaggtgtgtgagaaggttcaaaggaaaggaacgacctcttataacgaggtcgctgatgaa
ctggtggcagagttcagtaccccagataaccacatttcacccaatgattcacatgtttac
gatcagaaaaatatcagacgtcgagtctatgatgccttaaatgtgcttatggcaatgaat
attatctctaaggagaagaaggaaatcaaatggatcggactccctaccaactcagctcag
gaatgtcagaatttagaggtggagaggcaaagaaaacttgagagaataaagcaaaagcaa
tcccagctacaggaactcattctacagcaaattgcctttaaaaatcttgttcagagaaac
cgtcagcaagagcagcagacgagtcgacccccgccttccaactctgtgatccacttaccc
tttataatagtgaacaccagcaagaagacagtcattgactgcagcatctcaaatgacaag
tttgaatatttatttaactttgataacacttttgaaattcacgacgacattgaggtgttg
aagcgaatgggaatggcctgtggtttggagtctgggaagtgctcaccagaggacctgaag
attgcaaggagcttgatacccaaagcactggaaccatacctaacagaaatggctcacgga
tcaatcaacaatgtttatgtccctggagaggcttccaatgggggtcgttgtcatactggg
agtgacaatggtgcagaagggacagtggcctccagttctaatggctcccattacagtggc
tccagagtagagacccctgtgtcctacatggaggatgatgatgaagacgaggacgactat
gacgagaatgatgacgaagactag
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