Polyodon spathula (Mississippi paddlefish): 121327895
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Entry
121327895 CDS
T07273
Symbol
cars2
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121327895 (cars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121327895 (cars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121327895 (cars2)
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
121327895 (cars2)
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121327895 (cars2)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121327895 (cars2)
Prokaryotic type
121327895 (cars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
CysS_C
Motif
Other DBs
NCBI-GeneID:
121327895
NCBI-ProteinID:
XP_041128147
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All DBs
Position
15:11525708..11538134
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AA seq
599 aa
AA seq
DB search
MSIVNHLLPFWRLTSKTRLFDLSYFKARTFQEINVDCFNKVKHFRSVTLCTGSEKKWQKP
MGFDTGLKTYNSLTKGKEPLILAKEGIATWYSCGPTVYDHAHLGHACSYVRFDIVQRILT
RVFGINVIHVMVITDIDDKIIKRASELNMSSTVLARLYEEEFKSDMAALKVLPPTVYMRV
TENIPQIIAFIEGIINKQHAYATPKGSVYFDIKSIGSRYGKLMGGFVDSGGELGDTGDTD
KRNARDFALWKASKPQEPFWESPWGKGRPGWHIECSTIASTVFGSQLDIHSGGIDLAFPH
HENEIAQCEAYHQCAQWGNYFLHSGHLHLKGSEEKMSKSLKNFITIKDFLQTFSANEFRM
FCLLTKYRSAIDYSDASMNEAKSVLSSISSFFNDAGAYMTGKLLCQSVDEGFLWKRLAAA
KVDVQTALTDDFDTPRAVDAIMGLIHHGNRQLQSVTKGGQSSRSPAVFGAILSYIEGFLD
TVGVAVKENTCVTGESSPGTLPSVVEQLVSFRSRVRSYALATDELAPVLSDCSELSEERK
SQLKEHRKQLIQEREPLLKACDVLRRDLAPLGINIKDRGNTSTWEITEKRTELQKEEAN
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagtcaatcacttgctgcctttctggagactgacaagcaaaacacgactgttt
gacttatcatatttcaaagcaaggacgtttcaggaaataaatgttgactgttttaataaa
gtgaagcatttcagatccgtcacgttgtgtacaggatccgagaagaaatggcaaaaacca
atgggatttgacaccggcttaaagacatacaacagcctcacgaaaggaaaagaacctcta
atactggcaaaagaaggaattgcgacctggtatagttgtggccctacagtatatgatcat
gcccaccttggccacgcttgttcctatgttagatttgatattgtgcaaaggattcttacc
agagtatttggaatcaatgttatccacgtgatggtcattactgacattgatgacaagatc
attaaaagagcctctgagttaaacatgtcttcaacagttcttgctcgactttatgaagag
gagtttaagagcgacatggcagcgcttaaggtacttcctcctacagtttatatgagagtt
actgagaacattccacaaatcattgcttttatagaaggcataataaacaagcagcatgct
tatgcaacacccaaaggcagtgtctattttgacatcaagtcaattggaagtcgatatgga
aagctaatgggcgggtttgttgactcgggaggggagctaggtgacacaggtgacactgat
aagcgaaatgccagggattttgccctttggaaggcatctaagccgcaggaaccattctgg
gagtctccatggggaaaaggaagacctggctggcacattgaatgttcgacaatagcaagt
actgtttttggaagtcaattggatattcattctggcgggatagaccttgcctttccacat
catgaaaatgagattgcacaatgtgaagcttatcatcagtgtgctcaatggggaaactac
tttctgcactcaggacatttgcatcttaaaggaagtgaagagaagatgtccaaatcttta
aaaaacttcatcacaataaaggactttttacagacgttttcagcaaatgaattcagaatg
ttttgccttcttaccaagtacagatcagcaattgactacagtgatgccagtatgaatgaa
gctaaaagcgttttaagttccatctcgtcgtttttcaatgatgcgggtgcttatatgaca
ggaaaattattgtgccagagtgttgatgaaggctttttgtggaaaaggttagcggctgca
aaagtggatgttcagacagcgctgacagatgactttgacactccaagggctgttgatgca
attatgggcctgattcaccatggcaaccggcagcttcagtcggttactaaggggggacaa
tcctccagaagcccagctgtgtttggagccattctttcttacatagagggattcttggac
acagtgggtgttgctgtaaaggagaatacgtgtgtaacaggagaaagttcccctggcact
cttcctagtgttgttgaacaattggtgagttttcgaagcagggtccgcagttatgccctg
gctaccgatgaactcgctccggttttatctgactgcagtgagctgtctgaggagaggaag
tctcagctaaaggagcacaggaagcagctgatacaagagcgggaacctcttctgaaggcc
tgtgatgtccttcggagagacctcgcaccccttggaattaacattaaggacagaggtaac
acctcaacatgggaaataacagagaagaggacagagctgcaaaaggaagaggcaaactag
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