Polyodon spathula (Mississippi paddlefish): 121327931
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Entry
121327931 CDS
T07273
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121327931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121327931
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121327931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
Rod_CreS
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
121327931
NCBI-ProteinID:
XP_041128222
LinkDB
All DBs
Position
15:complement(17985982..18011984)
Genome browser
AA seq
1866 aa
AA seq
DB search
MEDNHPDSAASPATPATGKSKLDTLSKEDLIKFTKKQVLVLQKVKSRCADLEQEVEKLKK
KSSGGADEAIIQELTERMDAVLLEKAETQQRFVLLQKENEKAKQEAKDSLDKVTELQKQF
DLSNVEHLKKIEDLKHELETVHSKHKEEAADFQKLLQESSKKEQMLTAQFRQQLGYQNEV
KELEEQFKLVRQKYEDQLCSLQQQLISSEEERRRETTMLKENQEAAIAECQKEIESLHGE
LLKIRTAHQEEVKELVDQLESAALEHEQERYRLLQVNEDLAEQLGQKENSLQDVEEEEEE
TDIEWVKKHSEPLVSGEQGEDEVIILKRMLKDLQSQHSILQDELTYLSNVKTGLELELQE
AKDEFLREKEELEFNIHELQLCNEDSNSIATKCKSDLQTTNDHWEMALNQHEQELQVLKQ
RHQKEIVTLEQTLLSTAEKEKGKALLEIQNLKEECEKLSIEKREAVDSYEKTMEILRTMQ
SELGATTGHFVKQYNAMKESNSAEIHELQQKLRVAFNEKDKLLERINNLESEAKSQQNTY
EELKLSECDWENKKQELLSILHHKDTALHELEEKLAALNLEKDDVLAALKHSEVEVEKLR
DACSTKQAECVEYQQNLTKDKTQVKALEEELTTLKKERDHLQEELHLVRSDKDSLSKFKD
EIGDLEKSLQAVSEEKERLRNDFEEKLQHLIELQHRLEDLTKDKAQLQQRLEEAEMQLGT
TFADKENITHQLKILESKLTVTCLEKEQKCSDLKTLEEDLTNLKLERDHLQEELNLARSD
SNNLYKLKAEIGDLEKSLQAVSQEKERLNKDIEEKQQQLTDFQFRLEYLTKDNTQLQQRL
DEAVIQLGANAAEKDYINHQLEILENKVAALCLEKEQKCSDLKALEDDLTKLKKERDETG
NLEKSLQAVSEEKERLRKDLEKKQQQLAEVRIHVFNYLQQEADTEVFANNDQAVEDISVL
VQKLWDKVMEGKRSALLQSDEQIAQLQDDIKRLREEGRLQEVELRSFNDDLSKERTLLKE
NLEEVLSDKEGLQRDLLEMKSRNEKMKIENESLLAQIEAVSEKLNEIEKEKNDEIDQTVQ
QVVGDDEREKLLRLLAEKESELSSLQGEIASLQGSEQNSSPAEEVIRELTDKIVNLEKEQ
KEKHEKMNKIKAVAVKAKKELDTTRKEVQALKEELELVKTERERLSGSVKDVIQAAESYK
NLLAEYDKQTEQLDLEKERGENFDRQIGELTKHLQATVLQKDQLISEKEDHLACLETLQM
NVKQLEAQILELQKGKSAVEKELEGEKLLKEHKIKDHSMSLKEIEDLQRHLQNQNHQLQQ
AVQELEILRKDAQQSSLMDMEMADYERLVKELNQNISDKESRIEEYEGEIKIQKQRWETL
QEEISSLKSCLDQTEDKNTKIKQLLVKTKKELADSKKSEADQLAIQSSLKRELEASQQQL
EDYKIQCADLTAERHKLQEQLRSMTNQLQSAKSAFQQKIATLQEECTAAKAEQVSTASEF
ESYKVRVHNVLKQHKNKSASQTEKDAATQERESMERMMDQLKAKLQETQHSLQANMNELQ
ALQSEHDTLLDRHNKMLQETVAKEAELREKLHSIQSENMVLKSEHTQTLSQLTNQNEALR
DSFREQVRHLQEDHRKTVETLQQQVSKVEAQLFQLQKEASTANPIPVQQTRKILQERKNT
DLPLFDLQSMAREEGEGMETTETESVSSSGTHIPSLELLLNSPEPKMEPLVWQAEPTKEE
LAQELNTATKSIEHMNGLLHETEATNVVLMEQVTLLKSEVRRLERNQEREKSVANLEYLK
NVLLQFIFLKSGSERQALLPVIHTMLKLSPEERSKLSAIAQGEEEAVVAARSSGWTSYLH
SWSGIR
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggaggataatcatccagactctgcggcctccccagcaactccagcgacaggaaaatca
aagttggatactttgtctaaggaggacctcatcaagtttacaaaaaagcaggtgttggtt
ttgcagaaggtgaaatccagatgtgcagatttggaacaggaagttgaaaaacttaaaaag
aagtcaagtggtggagcagatgaggctataattcaggaactaacggaaaggatggacgca
gtacttctagaaaaggctgagactcaacagagatttgtattacttcaaaaagaaaatgaa
aaggcaaagcaagaggcaaaggattccttggataaagtaacagaacttcagaagcagttt
gatctgtctaatgttgagcacctaaagaaaatcgaagatttaaaacatgaattagaaact
gttcattcaaagcataaagaagaggctgcagattttcaaaaacttttgcaggagtccagc
aaaaaagagcaaatgcttactgctcaattcaggcagcagcttggctaccagaatgaagta
aaagagttagaagaacagttcaaactagtccggcagaaatatgaggatcagctgtgtagc
ctgcagcagcaattaatctcttctgaagaagaaaggagacgagagacgacaatgttaaaa
gaaaaccaagaagcagcaatagcagagtgccagaaggaaatcgaaagccttcatggagag
ctcttgaaaataaggacagcccaccaggaagaagtaaaagagcttgtggatcagcttgaa
tcggcagctttggagcatgagcaagagaggtatagactgcttcaagtgaacgaagacctg
gcagagcagctaggtcagaaagaaaacagccttcaggacgtggaagaagaagaggaggaa
actgacatagagtgggttaaaaaacattctgagcctttggtttctggggagcaaggtgaa
gatgaggtcatcatcctgaaacgcatgttaaaggatttgcaatcccagcatagtatccta
caggatgagttgacatacctgagtaacgtgaaaacagggttggagttggaactccaagaa
gccaaggatgagttccttcgtgagaaagaagaactggagtttaatattcacgagctacaa
ctgtgcaatgaagacagcaatagcattgccacaaaatgtaaatccgatctccaaaccact
aacgaccactgggagatggcactaaaccagcatgaacaagaattacaagttctgaagcaa
cgacatcagaaggagattgtgacactggaacaaactttgctttccactgctgagaaggaa
aaaggaaaggcgcttttggaaatccagaatctaaaggaagagtgtgagaagctctctata
gagaagcgtgaggcagttgacagttatgagaaaacaatggagatattaaggactatgcag
tctgagttaggggctacaacaggacattttgtgaaacaatacaatgcaatgaaggaaagc
aattctgctgaaatccatgagctgcaacaaaaactaagagttgccttcaatgagaaggat
aaactccttgagagaatcaacaacctggagtcagaggcaaagtcccaacaaaacacctat
gaagaattaaagttgtctgaatgtgactgggagaacaaaaaacaggaactattgtctatc
ctgcatcataaagacactgctttacatgagcttgaggaaaagttggcagctttgaactta
gagaaggatgatgtgctggcagcattaaaacattctgaagtagaggtggaaaagcttaga
gacgcatgttctacaaagcaagcagaatgtgttgaatatcagcagaaccttaccaaggac
aaaactcaggtaaaggcactagaggaggaactgactaccctaaagaaagaaagggaccat
ttgcaagaagagcttcatcttgtcaggtcggataaagacagtctgtccaagtttaaagat
gaaattggggatctggagaagtctttgcaggctgtgtcagaagaaaaagagagactaaga
aatgactttgaagagaagctgcaacacttaattgagttacagcatcgattggaagacctt
accaaggacaaagcacagttacaacagagacttgaagaagcagaaatgcaactgggaacc
acttttgcagataaagagaatattacccaccagctaaaaatcctagagagtaaattaaca
gtgacttgtttggaaaaggaacagaagtgttctgatctgaagacactagaggaagatctg
actaaccttaagcttgaaagggaccatttgcaagaagagcttaatctagccaggtctgat
agtaataatctttacaagcttaaagctgaaattggggatctagagaagtctttacaggct
gtgtcacaagagaaagagaggctgaataaagacattgaagagaagcaacaacagttaact
gactttcagtttagattggaataccttaccaaggacaacacacagctacagcagagactg
gatgaagcagtaatccaattgggagctaatgctgcagaaaaggactacatcaaccaccag
ctagaaatcctggagaacaaagtagcagcgttgtgtttggagaaggaacagaagtgttct
gatctgaaagcactagaggatgatctgactaaacttaagaaagaaagagatgaaactgga
aatctggagaagtctttgcaggctgtgtcagaagagaaagagaggctcaggaaagacctt
gaaaagaagcaacaacagttagctgaagtaaggattcacgttttcaactatctgcaacaa
gaagcagacactgaagtgtttgcaaataacgaccaagcagttgaggacatttctgtcctg
gtccaaaagctttgggataaggttatggaaggaaaacgcagtgcgttgctgcaaagtgat
gaacaaattgcacagctgcaagatgatattaaaaggctaagagaggaaggcagacttcag
gaggttgagcttcggtcatttaatgatgacttatcaaaagagaggaccctgctgaaggaa
aaccttgaagaggttctctcggacaaagagggattacagagggacctgttagagatgaaa
agcaggaatgagaagatgaagattgaaaatgaatctcttctggcccaaattgaggctgtg
tctgaaaagctaaatgaaattgaaaaagaaaagaatgatgagatcgatcaaactgttcag
caagtggtgggagatgatgaaagagaaaaactcctacgcttgctggcagaaaaagaatcc
gagttgtccagtctgcagggagagattgcatctttgcaggggtctgaacagaattcttct
ccagctgaagaggttataagagagctaactgacaaaatagttaatctggaaaaggagcaa
aaagaaaaacacgagaagatgaacaagattaaagctgtggcggtgaaggccaaaaaggag
ctggatacaactagaaaagaggttcaggccttgaaggaagaactggagttggtgaaaacc
gagagggagcgtctctctggctcagtaaaggatgtaattcaagcagctgaaagctacaag
aatctcttagccgagtatgacaagcagactgaacaactcgacctggaaaaggagcgagga
gaaaattttgatcgtcagattggagagcttacaaagcatctgcaggctacagtcctacag
aaagaccagttgatctcggaaaaggaagatcacttggcatgccttgaaaccctgcagatg
aatgttaagcagctggaggctcagattttagaactgcagaagggaaaatcagcagtggaa
aaggaactagaaggagaaaaacttctgaaggagcacaagataaaggaccacagtatgtct
ttaaaagaaatagaagatcttcaaaggcaccttcagaaccagaatcatcaactccagcaa
gctgtacaagaactggaaatattgagaaaggatgctcagcaaagctcattgatggatatg
gagatggctgattatgaacgactggtgaaggaattaaaccagaacatctctgacaaagaa
agcaggattgaggagtatgagggggagattaaaatacaaaaacagagatgggaaacactg
caggaggagatatcatccctgaagtcatgtttggatcaaaccgaggataaaaacacaaag
ataaaacagctgctggttaaaacaaagaaggagttagccgattcaaaaaagagcgaagca
gaccagctcgctattcagtcatcattgaaacgggaactggaggcaagccagcagcaactg
gaagactacaagatccagtgtgccgatctcacagcagagagacacaagctgcaggaacag
ctgagatcaatgaccaatcagctccaaagtgcaaaaagtgcatttcaacagaaaattgca
acactgcaagaggaatgcaccgctgctaaggcagagcaggtttctactgcctcagagttc
gaaagctataaagttcgcgtacacaacgttttaaagcaacataagaacaagtctgcatct
cagactgaaaaagatgcagctacacaggagagagaatccatggaaaggatgatggaccag
ctgaaagccaagctccaggagacccagcacagcctacaggcgaacatgaacgagctgcag
gccttgcagtctgagcacgacactctcctcgatcgacacaataagatgctgcaggaaacc
gtggccaaggaggcagaactcagggagaaactccactcaatacagtctgagaacatggtg
ctgaagtcggagcacacccagaccctgagtcagctgaccaaccagaacgaggctcttcgg
gacagcttccgggagcaagtgcgccacctgcaggaggatcacagaaagactgtggagacg
ctgcagcaacaggtcagcaaggtggaggcccagctcttccagctccagaaggaggcaagc
acagcaaatcctattccagttcagcaaacaaggaagatattgcaggagcggaagaacaca
gatcttccgctgtttgatttgcaatcaatggctagagaggagggagagggaatggaaaca
actgagactgagtcagtgtcctcctctggcacccacataccttcattggaactacttctg
aactctcctgagccaaagatggagcctctagtgtggcaagctgagccaaccaaagaggaa
ttggcacaggaattaaacacagcaaccaagagtattgaacacatgaatgggcttcttcat
gaaaccgaagccaccaatgttgtcctaatggaacaggtcacgcttctgaagagcgaggtg
agaaggctggagaggaaccaggagagagagaagtctgtagctaatctggagtacctgaag
aatgtcctgctgcagtttatattcctgaagtcaggcagcgagagacaggccctcttgcca
gtaatccataccatgttaaagctcagcccagaggagaggagtaaactgtctgcaatagca
caaggtgaagaagaagcagtcgtggccgccagatcatccggctggacttcatatcttcac
agctggtcaggaataagatga
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integrated database retrieval system
