Polyodon spathula (Mississippi paddlefish): 121328023
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Entry
121328023 CDS
T07273
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121328023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328023
03021 Transcription machinery [BR:
pspa03021
]
121328023
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121328023
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
121328023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3638
Motif
Other DBs
NCBI-GeneID:
121328023
NCBI-ProteinID:
XP_041128388
LinkDB
All DBs
Position
15:24895019..24923997
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AA seq
803 aa
AA seq
DB search
MRVQEQTSFENAQQDDMQESRMSNPSETSKPTMECGDGSTDIYTTGYGPLQHLICWDVLA
AGSKLASAQTNGLDFQRQSVQTSAITNAHAQALLHQVQLAGASLQAASQTVNFQSKTEES
ADSQVSSHPSIQHSVQSALPQTPLMLAGGQITGLTLTPAQQQLLLQQAQAQLLAAAVQHS
ANQQHNATGATISASAATPMTHIPLSQPIQITPDLQQLQQFQQQNLNLQQFVLVQPGHPI
ATQLQPAQFIISQTPQGQQSLLQAQNLLTQLPQQSQANLLQSQPSITLTAQPATPTRTIA
ATPIQPLPQNQMTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLTSDQALSSPSALNSSGMGIEG
LNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKE
KRINPPSSGSMSSTPIKAIFPNPATLVPSTASLVTSNTPTTLTVNSVLPITSTAVTNIGF
TGMRDADTSAILQQLYAYYHGTTGIGSATNTASVISSTPVASSAVTSPSLSPSPTSLPTS
ATELVSTHETSTTTQASTAMSSPLGTSQVMVTASGLSAALQGAATQLPANAGLAAMAAAA
GLNPGLMSSQFAPGGALLSLNPGTFGSALNPALLSNSTLIQALASGGSLPITSLDASGNL
LFANANAGGNLVTAPLFLNPQNLSLLTSNPVSLVSATAASASASAQALNLQVTSAMAESN
QNVVTSVGGAAAASTITTASKAQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcaggagcagacttcttttgaaaatgcacagcaagatgacatgcaagaatca
agaatgagtaatccatcagaaacaagtaaacctacgatggagtgtggtgatggaagcaca
gatatatatacaacaggatatggtccactacaacatctaatttgctgggatgtcctggct
gcaggcagcaaacttgcaagtgcccaaacaaatggattggactttcagagacagtctgtg
caaacaagtgcaatcactaatgcacatgcacaggcattacttcatcaggtccagcttgca
ggagcaagtttacaggctgcttctcagacagtaaatttccagtctaaaacagaagaatct
gctgattctcaagtctcaagtcatccttccattcagcactcagtacagagtgccctcccg
cagactccgctcatgttggcagggggacagatcactggactaaccttgacgcccgcacag
cagcagttgctactccaacaagcacaggctcagctgctggcagcagcagtccaacactct
gccaatcagcaacataatgccactggggcaaccatctctgcatccgcagctactccaatg
acacacatacccctttcacagcctatccagataacaccagacctgcagcagcttcagcag
tttcagcagcaaaacctgaatctacagcagtttgtattggtgcagccgggacacccaatt
gcaacccagttgcaaccggctcagttcatcatatcacagacgccacaggggcagcagagt
ctcctgcaagctcaaaatcttttaacacaactacctcaacaaagccaagctaacctcctg
cagtcacagccaagtatcaccctcactgcacagccagctacgccaacgcgcacaatagcg
gcgacacccattcagccccttccacagaatcagatgacaccaaagcgcatagacactccc
agtttagaggagcccagtgatctggaggagttggagcaatttgctaaaactttcaaacag
aggagaatcaaactgggattcactcagggcgatgttggacttgctatggggaaactgtat
ggaaatgattttagtcaaacaacaatctctcgctttgaagccttgaacctcagctttaaa
aacatgtgcaagcttaaacccttgcttgaaaagtggctaaatgatgcagagaatttgaca
tctgaccaagctttgtccagcccaagtgccctgaactcctcaggaatgggaatagagggg
ctgaatcgcaggagaaagaaacgcaccagcattgagacaaacataagagtggccttagaa
aagagttttctagagcagaaccaaaagcctacctctgaggagattacaatgatagctgac
cagctgaatatggagaaggaggttatccgtgtgtggttctgtaatcgacggcaaaaagaa
aaaagaatcaatccgcccagtagtggcagcatgagcagcactcctattaaagcaatcttc
ccaaatcctgctacactggtgcccagcactgctagccttgtgaccagtaatacaccgact
acactgactgtaaactcagttctgcctataacaagcactgctgtaactaatattggcttc
acaggtatgagggacgcagatacttctgcaatattgcaacaactttatgcttattatcac
ggcacaacaggaattgggtctgccactaacacagcatcagtgatctcatccacaccggtc
gcttcgtcagctgtgacctcaccttcactcagcccttcccctacttcattacctacatca
gcaacagaattagtcagcacacatgagaccagtaccaccacacaagcatccactgccatg
tcatctccactgggcaccagccaggtcatggtgacagcatctggactgtcggcagctttg
caaggagcagccacgcagctgcctgctaatgcagggttggcagctatggcagcagcagcg
gggcttaatcctggtctgatgtcctctcaatttgcaccaggtggtgccttactaagcctc
aatccaggaacgtttggcagtgctttaaacccagcattgttgagcaacagtacccttatt
caagctcttgcatccggcgggtctcttccaataacctcgctggatgccagtggaaatctc
ctgtttgccaatgcaaatgcagggggtaaccttgtgactgccccgttgttccttaacccg
caaaacctttctttgctcaccagcaacccagtcagcctggtttctgcaactgctgcctct
gcaagcgcttctgcacaggccttgaacctccaagtcacgtcagctatggccgaatcaaac
cagaacgttgtcacttctgtaggcggggctgctgctgcatcaaccattactaccgcctcc
aaggcccaataa
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integrated database retrieval system
