Polyodon spathula (Mississippi paddlefish): 121328072
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Entry
121328072 CDS
T07273
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121328072
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121328072
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121328072
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121328072
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
121328072
NCBI-ProteinID:
XP_041128485
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Position
15:complement(26425465..26723702)
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AA seq
550 aa
AA seq
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MLWIGFFCTFSVLSLSIGADLKPRSCSDVRQAYTAKGFSLVNVPHQEISGEHLRICAQGY
TCCTSEMEDKLSQQSKLEFENLVEEASHTLRTTFVSRHKKFDEFFRELLENTRKSLNDMF
VRTYGHLYMQNSEVFQDLFAELKRYYTGGNVNLEEMLNDFWARLLERMFQLVNAQYHFTE
DYLECISKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPGC
IRALMKMLYCPHCRGIPALKPCNNYCLNVMKGCLANQADLDPEWNLFIDAMLLVAERLEG
PFNIEAVMEPIDVKISEAIMNMQENSMQVSSKVFQGCGQPKPAPAGRATRAVSDVFNHRY
KPSEERPTTAAGTSLDRLVVDIKEKLKKSKKFWSTLPDSICSDVKVTGDRSDEEECWNGH
TKGRYLPEVMNNGLTYQINNPEVEVDITRPDTFIRQQIMALRVMTNKLRNAYNGNDVNFQ
DASDEGSGSGSGSGCIEMCIPQFEVISTKAPTVVVDRFAETKASAPKPSHSLVLTVFLLC
TIFALQRPLR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggatcgggtttttttgcactttctccgtgctgtcgctttcaattggagctgat
ctcaaaccacgaagctgcagcgacgtcaggcaagcgtatactgctaaaggcttcagtctg
gtcaatgttcctcaccaggaaatatcaggggaacatctgcgaatctgtgcccagggatac
acatgctgtacctcagaaatggaagacaaactcagccagcagagtaaactggagtttgaa
aacctggttgaggaagcaagtcacaccctgcgtacaacctttgtttccagacataagaag
tttgatgaattcttccgggagctcctggaaaacaccaggaagtccttaaatgacatgttt
gtgcgtacgtacggccacttgtacatgcagaactccgaggtgtttcaggacctgtttgca
gagctcaagaggtactacacgggtgggaacgttaacttggaggagatgctgaacgatttc
tgggctcgactgcttgaacggatgtttcagctggtgaacgcacagtaccactttacagag
gactacttggaatgcattagcaaatatacagaccagctaaagcctttcggagatgtgcca
agaaaactcaaggttcaggttaccagagcattcattgctgctcgcacctttgtccagggt
ctcactgttggcagggaggtggcgaacagagtatccaaggtcagcccaactccagggtgc
atccgggcactaatgaagatgttgtactgtcctcattgtcgtggaattcctgccctaaag
ccctgcaacaactactgcctgaatgtaatgaagggatgcctggcgaaccaagccgatctt
gatccggaatggaatctcttcatagatgccatgttgttggtggcagagaggctggaggga
ccttttaacatcgaggctgtgatggagcccatcgatgttaagatttctgaagccatcatg
aatatgcaggaaaacagcatgcaagtgtcatcaaaggtgtttcaaggttgtgggcagccc
aaaccagctcccgctggaagagccactcgtgctgtttcagacgttttcaaccaccgctac
aagccatccgaagaaaggcccaccacagcagctggcacaagcctcgacagactggttgtt
gatattaaagaaaaactgaagaagtccaaaaagttctggtccacattaccagacagcatc
tgcagtgatgtcaaagtgacaggtgacagatctgatgaagaggaatgctggaacgggcac
acgaagggcaggtacttgcctgaagtgatgaacaatggcctgacataccagattaataac
ccagaagttgaagtagacatcacaagaccagacactttcattcgtcagcagatcatggca
ctcagagtaatgactaacaagctgaggaatgcatataatgggaatgatgtcaattttcaa
gatgcaagtgatgaaggcagtgggtcaggaagcggcagtggctgcattgagatgtgcatc
cctcagtttgaagttatcagcacaaaagcccccactgtcgtcgtggacagatttgctgaa
acaaaggcttcagcccccaagccgagccactctctggtgctcactgtgttccttctctgc
acgatcttcgcactgcagagaccattgagataa
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