Polyodon spathula (Mississippi paddlefish): 121328124
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Entry
121328124 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121328124
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121328124
09158 Development and regeneration
04382 Cornified envelope formation
121328124
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121328124
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121328124
03036 Chromosome and associated proteins [BR:
pspa03036
]
121328124
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121328124
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121328124
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121328124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
121328124
NCBI-ProteinID:
XP_041128560
LinkDB
All DBs
Position
15:8394673..8428687
Genome browser
AA seq
585 aa
AA seq
DB search
MKLKMPAAPVLQPVLKMKVDELFLNWLSETATQLMLKDYLKRIKNGERFECGEGDLKDNR
PLVYSENKNNFRSKQKVTDKAVSSLSAPSSPPSPITTALPSGNTGSPRVGQNRTVRRSIG
SKLAQVKKEEPLTPTLSESIPKFYFPRGRPKPNINIDALISRIEKTFSQFPNERATLEDM
GKVAKACECPLYWKAPLFCAAGGDRTGFVSVHKFIAMWRKKIQTCHDDAAKFVQLLAKPT
CNYLEQEDLIPFLQDVVNTHAGLTFLREASDFHSRYITTVIQRIFYNVNRSWTGKITCSD
LRKSSFLQNVALLEEEEDINQLTEYFSYEHFYVIYCKFWELDTDHDLYIDQKDLARHNDH
ALSHKMIERIFSGAVTRGRKIQKERKMSYADFVWFLISEEDKKTNTSIEYWFRCMDLDGD
GVLSMYELEYFYEEQCQKLENMAIEPLPFEDCLCQMLDLVKPECEGKITLHDLKKCKLSH
IFFDTFFNIEKYLDHEQKDPFSREGENEGQEISDWERYAAEEYEILVAEEAANEQFDGYE
NDLDPIDRQISNELNLRGDKRSFFEIPNPHPNINLDEYEYEDDFE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaagatgcctgcggcacctgttcttcaacctgtcctgaaaatgaaagttgat
gaactctttctaaactggttgagtgaaacagccacccagttgatgctcaaggattacctc
aaacggatcaagaatggagagaggtttgaatgtggtgaaggggatttgaaagacaacagg
cctctagtttatagtgaaaataagaacaatttcagatcgaagcagaaggtgactgataaa
gccgtctcttctttaagtgctccttccagtcctccctcccccattactacagcactacca
tctggtaacactggcagtccgagggtgggtcagaatagaacagtacgacgatcaataggt
tctaaactggctcaagtaaagaaagaggaacccctaacaccaacactaagtgaaagcatt
ccaaaattttacttccctcgaggacggcctaaaccaaatatcaacattgacgctctaatt
tccaggatagagaaaactttttcacaattcccaaatgaaagggctactctggaagacatg
gggaaggtagccaaagcctgtgagtgcccactctactggaaagctccattgttctgtgcc
gctggtggggacagaacaggatttgtgtcggttcacaaattcattgcaatgtggagaaaa
aaaatacagacctgccatgatgatgcagcaaagtttgtccagcttttggccaaaccaacc
tgtaattatttagaacaagaggacttgattccattccttcaggatgtggtaaatacacat
gctggtctcacgtttctaagggaggcatcagactttcattctcgctatattaccacagtt
attcagaggatattttataatgtaaaccgatcatggactggaaaaataacttgttcggat
ctcagaaaaagcagtttcttgcagaatgtggcattgctggaagaggaggaggatattaat
cagcttacagagtatttctcttatgagcatttctatgtcatttactgcaagttttgggag
ctagacacagaccacgacctttacattgatcagaaggacttggccaggcacaatgaccac
gcattgtcccataaaatgattgaaagaattttctctggagcagttacaagaggcagaaaa
attcaaaaggaaagaaaaatgagctatgctgactttgtgtggtttctaatttctgaagag
gacaaaaagacaaacacaagcatagagtactggttccggtgtatggatcttgatggagat
ggagtgctgtctatgtatgagcttgaatatttctatgaggagcaatgccagaagctggag
aacatggccatagaaccactaccttttgaagattgcctctgccaaatgctggaccttgtc
aaaccggaatgtgaaggcaagattaccctccatgacctgaagaagtgcaagttgtcacat
atattttttgataccttttttaatattgagaagtatttggaccatgagcagaaagatcca
ttttcaagggaaggagagaatgaagggcaagagatttctgactgggagaggtacgctgca
gaggaatatgaaatcctggtagctgaagaagcagccaacgaacagtttgatggctatgaa
aatgacctcgaccccatagaccgacaaatctcaaatgagttaaacctgcgaggggacaag
agatctttcttcgaaatacccaacccacaccccaacatcaatttggatgaatatgagtat
gaagatgattttgaatga
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