Polyodon spathula (Mississippi paddlefish): 121328124
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Entry
121328124 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121328124
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121328124
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121328124
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121328124
03036 Chromosome and associated proteins [BR:
pspa03036
]
121328124
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121328124
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121328124
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121328124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
121328124
NCBI-ProteinID:
XP_041128560
LinkDB
All DBs
Position
15:8394673..8428687
Genome browser
AA seq
585 aa
AA seq
DB search
MKLKMPAAPVLQPVLKMKVDELFLNWLSETATQLMLKDYLKRIKNGERFECGEGDLKDNR
PLVYSENKNNFRSKQKVTDKAVSSLSAPSSPPSPITTALPSGNTGSPRVGQNRTVRRSIG
SKLAQVKKEEPLTPTLSESIPKFYFPRGRPKPNINIDALISRIEKTFSQFPNERATLEDM
GKVAKACECPLYWKAPLFCAAGGDRTGFVSVHKFIAMWRKKIQTCHDDAAKFVQLLAKPT
CNYLEQEDLIPFLQDVVNTHAGLTFLREASDFHSRYITTVIQRIFYNVNRSWTGKITCSD
LRKSSFLQNVALLEEEEDINQLTEYFSYEHFYVIYCKFWELDTDHDLYIDQKDLARHNDH
ALSHKMIERIFSGAVTRGRKIQKERKMSYADFVWFLISEEDKKTNTSIEYWFRCMDLDGD
GVLSMYELEYFYEEQCQKLENMAIEPLPFEDCLCQMLDLVKPECEGKITLHDLKKCKLSH
IFFDTFFNIEKYLDHEQKDPFSREGENEGQEISDWERYAAEEYEILVAEEAANEQFDGYE
NDLDPIDRQISNELNLRGDKRSFFEIPNPHPNINLDEYEYEDDFE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaagatgcctgcggcacctgttcttcaacctgtcctgaaaatgaaagttgat
gaactctttctaaactggttgagtgaaacagccacccagttgatgctcaaggattacctc
aaacggatcaagaatggagagaggtttgaatgtggtgaaggggatttgaaagacaacagg
cctctagtttatagtgaaaataagaacaatttcagatcgaagcagaaggtgactgataaa
gccgtctcttctttaagtgctccttccagtcctccctcccccattactacagcactacca
tctggtaacactggcagtccgagggtgggtcagaatagaacagtacgacgatcaataggt
tctaaactggctcaagtaaagaaagaggaacccctaacaccaacactaagtgaaagcatt
ccaaaattttacttccctcgaggacggcctaaaccaaatatcaacattgacgctctaatt
tccaggatagagaaaactttttcacaattcccaaatgaaagggctactctggaagacatg
gggaaggtagccaaagcctgtgagtgcccactctactggaaagctccattgttctgtgcc
gctggtggggacagaacaggatttgtgtcggttcacaaattcattgcaatgtggagaaaa
aaaatacagacctgccatgatgatgcagcaaagtttgtccagcttttggccaaaccaacc
tgtaattatttagaacaagaggacttgattccattccttcaggatgtggtaaatacacat
gctggtctcacgtttctaagggaggcatcagactttcattctcgctatattaccacagtt
attcagaggatattttataatgtaaaccgatcatggactggaaaaataacttgttcggat
ctcagaaaaagcagtttcttgcagaatgtggcattgctggaagaggaggaggatattaat
cagcttacagagtatttctcttatgagcatttctatgtcatttactgcaagttttgggag
ctagacacagaccacgacctttacattgatcagaaggacttggccaggcacaatgaccac
gcattgtcccataaaatgattgaaagaattttctctggagcagttacaagaggcagaaaa
attcaaaaggaaagaaaaatgagctatgctgactttgtgtggtttctaatttctgaagag
gacaaaaagacaaacacaagcatagagtactggttccggtgtatggatcttgatggagat
ggagtgctgtctatgtatgagcttgaatatttctatgaggagcaatgccagaagctggag
aacatggccatagaaccactaccttttgaagattgcctctgccaaatgctggaccttgtc
aaaccggaatgtgaaggcaagattaccctccatgacctgaagaagtgcaagttgtcacat
atattttttgataccttttttaatattgagaagtatttggaccatgagcagaaagatcca
ttttcaagggaaggagagaatgaagggcaagagatttctgactgggagaggtacgctgca
gaggaatatgaaatcctggtagctgaagaagcagccaacgaacagtttgatggctatgaa
aatgacctcgaccccatagaccgacaaatctcaaatgagttaaacctgcgaggggacaag
agatctttcttcgaaatacccaacccacaccccaacatcaatttggatgaatatgagtat
gaagatgattttgaatga
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