Polyodon spathula (Mississippi paddlefish): 121328135
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Entry
121328135 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF149-like isoform X1
KO
K15704
E3 ubiquitin-protein ligase RNF149 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328135
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121328135
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121328135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
CrgA
PspB
zf-RING_16
Prok-RING_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
121328135
NCBI-ProteinID:
XP_041128580
LinkDB
All DBs
Position
15:6832025..6863864
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AA seq
426 aa
AA seq
DB search
MRAGLSCLFAPICPSVRTSATASSFRSWPHWRNCVTFLYLLQFQFQQLPCRSMEWHTAFV
TTTYMDPATNLTVTENTESGRYGDSSPKDSVDGHVGIPRTVKDTEGCDPNAEYYLPTRAG
SLSTEPWIALVARGNCTFKDKVLNAARKNAAAVVIYNEAKYGNTTIPMSHIGTGNTVVVM
VGYPKGIEILELIRRGIPVKMSIAVGTRHVQEFLSGQSVVFVTIAFIAMMIISLAWLIFY
YIQRYLYAGTQFGNQNNRKETKKAISQLQLHTVKRGDKEINLDAENCAVCIENYKPKDVV
RILPCKHVFHRTCIDPWLLDHRTCPMCKLDVIKALGYLVDPEEAIEVTAPESLPDSVTIR
SLSVSLQDDVDNEVSSSSSAPSRQAPQDDSGPVEEAGESVALLDDNQKCEDSREKTPDPD
DITVIS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctggactgtcttgtttgtttgctccaatttgcccctctgtgaggacatcagca
acagcatcatcttttcggtcatggccgcactggaggaattgtgtcacttttctatatctt
ttgcagtttcagttccaacagttgccctgccggtccatggaatggcacacagcgttcgtc
actacgacatacatggatccagccaccaacctgacagtcacagaaaacacggagagtggc
aggtatggggacagttcccccaaggatagcgtcgatggtcatgtggggatccccagaact
gtaaaggacacagagggctgtgaccctaacgccgaatactatttaccaacccgagctggc
tcactctctacagaaccgtggattgcactagtcgccagaggcaattgtacgttcaaggac
aaagtgttgaatgcagctagaaaaaatgcagccgcagtggtcatctacaatgaagctaag
tacggcaacaccaccatccctatgtcccatattgggactggaaacacagtagtcgttatg
gttggctacccgaaggggatcgagattttagagctgatccgcagaggaatcccagtcaaa
atgtccatagctgtgggcacccgccacgtgcaggagtttttgagtggtcagtctgttgtg
ttcgtgaccatcgccttcattgcaatgatgatcatctccttggcttggcttatcttctac
tacatacagagatatctgtatgctggaacacagtttggaaaccagaacaatagaaaggag
accaaaaaagccataagtcagctgcagctgcacactgtgaaacgaggagacaaggaaata
aacctggatgcagagaattgtgcagtctgcattgaaaactacaaacccaaagatgttgtc
agaattcttccttgcaaacatgttttccacaggacttgcattgacccctggctactagat
cacagaacatgcccgatgtgtaaacttgatgttataaaagcccttggatatctggtggac
cctgaagaggccattgaagtgacagccccagagtctctgccagatagtgtgactatcagg
agcctgagtgtttctctacaggatgatgtggacaatgaagtcagcagcagcagcagtgcc
ccttctcgccaggccccgcaggatgacagcgggcctgtggaagaagctggagaatcagta
gctctacttgatgacaatcagaagtgtgaggatagcagagaaaagacccctgatcctgat
gacatcacagtcatctcttga
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