Polyodon spathula (Mississippi paddlefish): 121328264
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Entry
121328264 CDS
T07273
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121328264 (apex2)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121328264 (apex2)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121328264 (apex2)
BRITE hierarchy
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121328264
NCBI-ProteinID:
XP_041128782
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Position
16:22618129..22624875
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AA seq
614 aa
AA seq
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MRIVTWNINGIRTFKGKVKPVLDSLAADIICVQETKVTRDLLDERTAIVEGYSSYFSFSR
GRSGYSGVATFCKDSATPFAAEEGLTGLLTSQGGAVGSYGNREEFSDEELQSLDNEGRAI
ITQHKIRSSGDGEETLAVINVYCPRADPEKPERKLFKLRFYRLLQLRAEAILQTGSHVIV
LGDVNTSHRSIDHCDPDDPERFDENPGRKWLNEFLFGSSEGEEKADEERTGVVQETKLQC
PTGTSGGKFVDTFRYFHPSQTHAFTCWSTLTGARQTNYGTRIDYIFANRKLVDTEFLDSK
IMPEVEGSDHCPVRGELRCVCLGDPKCPPLCTKHMPEFAGRQQKLSRFLVKVGHGERKEI
PKEVMSFLPGSQESGEIRENIRPGKDLNLGKKRGQLADSSSSLKSKKAKTANSKTGQQGS
LLAFFKPKLSEETKKKDLVIFGKTTGDDNCQTGPQQRCFTRFKSQTTSESLQETTLLERS
FKPQKNSTDETQKDLGTTTSQTDVQESQPSTNSSQENGPEQAMGDGSKEASGVKDIKPPE
LPESEGSAGFWKSVLRGPPPPPNCKAHREPCVLRTVKKAGPNFGKRFFVCGRPQGHASNP
EARCNFFVWVGKGK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagttacttggaatattaacggcatcagaaccttcaaagggaaggttaaaccg
gtcctcgactccttggcagccgatatcatttgtgtgcaagagaccaaagtgacaagagac
ctgttagatgagcgcacagcaattgtggaggggtacagctcctacttcagcttcagtcga
gggcgcagtggatattcaggggtggcgacgttctgtaaggacagtgccactccatttgct
gctgaggaaggtctgacgggcctgctgaccagtcaaggcggagctgtgggtagctatggt
aacagggaggagttctcagacgaggagcttcagtcattggataacgaggggcgagccatc
ataacgcagcacaaaatcaggagctcaggggatggagaggagaccctggctgtgatcaat
gtgtactgtcctcgcgcagacccagagaagccagaacgcaaactcttcaagctgcgattc
taccggctgctgcagctccgggctgaggctatacttcagacagggagccatgtgattgtg
ctgggtgacgtgaacacatctcacagatccatcgaccactgcgatcctgacgaccctgaa
cgctttgacgagaatccgggtaggaagtggctgaatgagttcctgtttggctcgagcgag
ggagaggagaaagctgacgaagaaaggactggggttgttcaggaaacaaaattacagtgt
cccacggggactagtggcggcaaatttgtggacaccttccgctacttccatccaagccag
actcacgcctttacatgctggtcaaccttaacaggagccaggcaaactaactatggcaca
cggattgactacatatttgccaaccggaagctggtagacactgaatttttagactccaag
atcatgccggaggtagaaggttctgatcactgcccggtgcgtggagagctacggtgtgtc
tgcctcggtgatcccaaatgcccgccgttgtgtaccaaacacatgcccgaatttgccggc
cgccaacagaagttatcccgcttccttgtcaaagtcgggcatggggagaggaaggagata
cccaaagaagtcatgtcatttcttccaggatctcaagagtcgggagaaatcagggagaac
atcagacctggaaaagatctcaatttgggaaagaagagggggcagctggcagactcttcc
tcctctttgaaaagcaagaaagctaaaaccgcaaattccaaaacgggacagcaagggagt
ttgctagccttcttcaagcccaagctcagtgaagagaccaaaaaaaaggatctagtcatt
tttgggaagacaacaggagatgacaactgccaaacgggacctcaacaacgttgtttcact
cgcttcaaatcacagactacctcagaatcactccaagaaaccactttgctggagaggtca
ttcaaaccccaaaagaattctacagacgagacccaaaaggatttgggtaccacgacttct
cagacagatgtacaagaaagccaaccttcaacaaactcctcccaagagaatggacccgag
caagctatgggggatggaagcaaggaagcatcaggagttaaggatatcaaacccccagag
cttcccgaatctgaaggatcggcaggtttttggaagtcggttctgcgtggaccccctcct
cctcccaactgcaaggcccacagggaaccctgtgtcctcaggacagttaagaaggcaggg
cccaatttcgggaagcggttctttgtctgtggccgccctcaaggtcacgcatccaatcct
gaagcccgctgtaacttctttgtgtgggtggggaagggcaagtaa
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