Polyodon spathula (Mississippi paddlefish): 121328280
Help
Entry
121328280 CDS
T07273
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121328280 (ap5b1)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
121328280 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
DUF7582
Motif
Other DBs
NCBI-GeneID:
121328280
NCBI-ProteinID:
XP_041128808
LinkDB
All DBs
Position
16:complement(2085672..2093238)
Genome browser
AA seq
933 aa
AA seq
DB search
MAAPNPEGWPQRVAAFSCSPSHFLSSTTPEDFLSDLLQDLKDDKVGESTKVLMLGPLQEH
PTILCPSQQVGEQTAATLLGVFSQMAHTPKYVNLKCHLMLSIATVIISTSVVKQGVKVAE
GFLDLLFQTAQDTNDQKHGGMFRPLRAMACDCLREVETCCPGLLSHKLEALYSLKQQEIT
PLHQAYTLLYGVALRNAVHCLTLQKDVMDGDLKKLLASNEGFAWKTTEKPLELVPLTTMS
RIPVLPSNVETKELKSVVSLLLEECYLLTPVTQAALLRELTQVVSMVQSLSPAIFKSQLL
RLFGTMEISLLHSTLQMKGTFTDSLFTAEDENFLLKRLVGMAQHPLLSTPQKLFYIECIL
HFPENRPISSNGEESLPVLVTPRMAASLFPTVFNDSRTMLSRLNILSLVYLEADEEEGID
YIFDHLMALHKIVDHHGTREMTTTFFRAVYIFMQNFYLNERYTRDLIESLSELYRRHYTL
APNLINLVDSTQKLLEDSSWPTDLLKALQVLIVELPLQQLIHQSLYWHLKVLGRVAKEEQ
ASQRSTVRFLLNLLINSSLCGLGDWRIGNALLSVCRNLLQHPNLDHVFIELADLLQFMMH
SFEDVDIQDHARFYYTLLTNLSKEKLSGVLNMGTVGSQAKIRSLSSIMAESEELSSCLTV
HRTRQPVLKLVKLSEDNISKFVHLNSGPEDSTPDVDLLKVYQNQFLNPDFASVVILKYNL
TFAGEVDALYHKLFCICLHFEQTDSNYERVSDVSVPCLIYDRKPCVVSLTLKPWRPYPTV
LHASAIFTTEDGLSWHTQLDPIPIGFPDLFLPLPVPVHWSQGSREQLFHQLWNSLSPEES
SPSATSLFCFEVGERSLKEVIESSFHQYLVSKEANPESYKVLLFLPPQFYVLLKIENSED
AASVSIITDNWKLLPFINSYIKCITDYSADSTQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccaaaccctgaaggctggccccagagagtagcagcgttctcctgcagcccc
agccatttcctctccagcaccactccagaggacttcctctctgacctgctccaggacctc
aaggatgacaaggttggcgagagcacaaaggtattaatgctaggcccactgcaggagcat
ccaactatcctgtgcccatcccagcaagtgggagagcagacagcagccactttactgggc
gtgttctctcaaatggctcacacgcccaaatatgtgaatctcaagtgccacctgatgcta
tccatcgccaccgtgataatatccacctctgttgtgaagcaaggggttaaagtcgctgag
ggctttctagatctcttgtttcagacagcacaggatacaaatgatcaaaagcatggtggg
atgtttagacccttgagagccatggcgtgtgattgccttagagaagtggaaacctgctgc
ccagggctgctttcccataagctggaggctctttattccctgaagcagcaggagattaca
cctttgcaccaagcatacaccctcctgtatggagtggccctaaggaatgcggtgcattgc
ctgactttgcagaaagatgtgatggatggagatctaaagaagctattagcaagcaatgaa
gggtttgcctggaagacaacagaaaaaccgctggagctggttccattgacaacaatgagt
cggatccctgttcttccttccaacgtggaaaccaaagagttgaaatcagttgtttccttg
ctcttagaggagtgctatctgctcaccccagtgacacaggccgctttgcttcgggaactg
actcaggtggtctccatggtccagtccttgtctccggccatcttcaagtctcagcttctt
cgtctctttgggaccatggagatctcccttctgcactccacgttgcagatgaaagggacc
ttcacagacagcctcttcacagccgaggatgagaactttcttctgaagcggctcgtgggc
atggcccaacacccactgctgtccaccccacagaagctcttttatattgaatgtatcctc
cacttcccagagaaccgtcctatctcctccaatggggaggagagcttgcctgtgttggtg
acccctcgaatggctgcctcccttttccccaccgtctttaatgacagcaggaccatgctg
tcccgcttaaacatcctcagtctggtctacctagaagctgatgaagaggaaggaatcgac
tacatctttgaccacctaatggctctccataaaattgttgaccaccatggcaccagagaa
atgaccaccacctttttcagagcagtctacatctttatgcagaatttttacctcaatgaa
aggtacacaagagacttgatagaaagtctttctgagctctaccgaaggcactacacctta
gcccctaacctgatcaacctggtggactctacccagaagcttttggaggactccagctgg
ccaactgacttgctgaaggccctacaagtgttgattgttgagctccctctacagcagttg
atccaccaaagcctgtactggcacctgaaggtcttaggcagggtggccaaagaggaacag
gcttctcagaggagcactgtgcgcttcctgctcaatcttctcattaactccagtctttgt
ggattgggagactggaggattggcaatgctcttctctcggtctgccgaaacttgcttcag
caccctaacctggatcatgtctttatcgagttggcagaccttcttcaattcatgatgcac
agcttcgaggatgtagacatccaagatcatgctcgcttctattacaccctgctgacaaac
ctttccaaggagaagctctcaggggttctgaatatgggaacagttgggagtcaagcaaaa
attaggtccttgtcatctatcatggctgaaagcgaagagctgtccagctgtttaactgtc
catagaaccaggcagccagtgctgaagcttgtcaaactttctgaagataatattagtaaa
tttgttcatttgaacagtggaccagaggacagtactcctgatgtagacctattgaaggtt
tatcaaaaccagttcttgaaccctgactttgcctctgtggtaattttgaaatataatcta
acttttgcaggtgaagttgatgcattataccataaactgttttgtatatgtttgcatttt
gagcagacagactctaattacgagcgagttagcgatgtcagtgtgccgtgcctcatctac
gacaggaagccttgtgtggtttccttgactctcaagccttggaggccctatccaacagtt
cttcacgccagtgcaatatttaccacggaggatggtctttcttggcacacccagctggat
ccaattcctataggcttcccagacttgtttctgcccctccctgtgcctgtccactggtct
cagggttccagagagcagctctttcaccaactctggaattctctgagtccagaagagtcc
agcccatctgccacaagcttgttctgctttgaagtaggcgagaggtctctgaaggaggtg
atcgagtccagttttcatcaatacctggtttctaaggaagcgaatcctgaatcttacaag
gttctgctgttcctaccccctcagttttatgttttgctgaagatcgaaaattcagaggat
gcagccagtgtcagtatcataactgacaactggaagcttttgccttttataaactcctac
attaagtgcatcacagattatagtgctgacagtacacaataa
DBGET
integrated database retrieval system
