Polyodon spathula (Mississippi paddlefish): 121328302
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Entry
121328302 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit delta-like isoform X1
KO
K05184
gamma-aminobutyric acid receptor subunit delta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121328302
04082 Neuroactive ligand signaling
121328302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121328302
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121328302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF621
Motif
Other DBs
NCBI-GeneID:
121328302
NCBI-ProteinID:
XP_041128843
LinkDB
All DBs
Position
16:complement(12365858..12376079)
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AA seq
454 aa
AA seq
DB search
MEFLTLIVPSLLVLSIQQYKFIRAMNDIGEYIGTDIEIYWLPNLDDLMKGYARNFRPGIG
GPPVNVAMAIEVASIDHISEVNMEYTMTVYLRQSWRDDRLSYNHTNKTLGLDSRFVEKLW
LPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDMDLTKYPMDEQECML
DLESYGYSSEDIVYHWSENQDQIHGLDKLELSQFTITDYRFDTEVMNFKSAGRFPRLSLR
FQLRRNRGIYIMQSYMPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMTTLMVSARSS
LPRASAIKALDVYFWICYVFVFAALVEYAFAHYNADYKYMRKPRTKIKANKSGAESFVKN
GKQAMVLFSLSMAGMNQDLMISNRQHRAQKPPGVPYGTDEVENGKTKSKKHDTKTEKKPI
FKPIGADTIDIYSRAVFPAAFAAVNVIYWVAYTM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagttcctcactttaattgtgccatccctgcttgtactctccatccagcagtataag
tttatcagggccatgaatgacattggcgagtatatcggaacagacattgaaatatactgg
cttcctaatctggatgatttgatgaaagggtatgctcggaatttccgcccagggatagga
ggtcctccggtgaatgtagccatggctatagaagtagctagcattgatcacatctcggaa
gttaacatggagtacacaatgacggtgtatctccgtcaaagctggcgagacgacaggctc
tcgtacaaccacaccaacaagactctggggctggacagccgcttcgtggagaagctgtgg
ctgccggacacgttcatcgtcaacgccaaatccgcctggtttcatgacgtcactgtggag
aacaagctcatccgcctgcagcccgacggagttatcctgtacagcattagaattacctcg
acagttgcatgtgacatggatctcaccaagtacccaatggatgaacaggaatgcatgctg
gatttggagagctatggctactcttctgaagatatcgtctatcattggtcagagaaccag
gatcaaatccatggactggataaactcgagctgtctcagtttaccatcacggactacaga
tttgacacagaggttatgaacttcaaatctgccggcaggtttcccaggctaagtcttcgt
ttccagttacggcggaatcgaggcatttacattatgcagtcctatatgccttccatctta
ttggtcgccatgtcttgggtttccttttggattagccaatcagctgtgcctgcaagggta
tcgttaggaatcaccacggtcctcacaatgaccaccctcatggtcagcgccaggtcgtct
cttccgagagcgtctgccatcaaagccctggacgtttacttctggatctgctacgtgttc
gtgttcgccgccctggtggagtatgcctttgctcactataacgccgactacaagtacatg
cggaaaccgagaacgaagatcaaggcaaacaaatctggagcagagtcctttgtaaaaaat
ggcaaacaagccatggtgctcttctccctttcaatggccggcatgaaccaggacttgatg
atttctaaccggcagcaccgggcccaaaagccccctggggttccctacggcacagatgag
gtcgagaatggcaagacaaagtcaaagaagcatgacaccaagacagagaagaagcccata
ttcaaacccattggcgcggacaccatcgatatctattcaagagccgtgttccctgcggcc
tttgctgctgtcaatgtcatctactgggtggcctacaccatgtaa
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