KEGG   Polyodon spathula (Mississippi paddlefish): 121328338
Entry
121328338         CDS       T07273                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03420  Nucleotide excision repair
pspa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121328338
  09124 Replication and repair
   03420 Nucleotide excision repair
    121328338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pspa04121]
    121328338
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121328338
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121328338
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121328338
SSDB
Motif
Pfam: Beta-prop_RIG_2nd WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 121328338
NCBI-ProteinID: XP_041128892
LinkDB
Position
2:76428659..76436739
AA seq 156 aa
MSSMIDSIRGCIKVAFFKSFSMLSGGADGVIVIFDFENSSRKPQYTCKSLCRVGRSSRHV
YQFSVETVQWYPHNTGMFTSSFFDKTLKVWDTETLLPAEVFHFEGNVYCHNKSPIARKHS
LIAVGTKDPKVQLCDLKSGSRIHILQALIAECDSGM
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcatcaatgattgatagtattagagggtgtattaaagtcgccttttttaaatctttc
agcatgttatcaggtggggcagatggagtcattgtcatctttgactttgagaattccagc
aggaagccgcagtatacttgcaaatcactatgtagagtgggcaggtccagtcgccatgta
taccagttcagtgtggagacagtgcagtggtatccacacaacactggcatgttcacatca
agtttctttgataagactctgaaagtatgggacacagagactttacttccagctgaggtt
ttccattttgaagggaatgtatattgtcataacaagtctcccattgcaaggaaacatagt
ttgatagcagttggtaccaaagaccccaaagtacagctttgtgacttgaagtctggttca
cgtatacacattctacaggcactgatagcagagtgcgattctgggatgtga

DBGET integrated database retrieval system