Polyodon spathula (Mississippi paddlefish): 121328343
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Entry
121328343 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH2-like
KO
K11969
ariadne-2 [EC:
2.3.2.31
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328343
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121328343
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121328343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
DUF4637
UBA_ARI1
Motif
Other DBs
NCBI-GeneID:
121328343
NCBI-ProteinID:
XP_041128894
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All DBs
Position
16:38769732..38787781
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AA seq
430 aa
AA seq
DB search
MSVDMNSQGSESNEDFDGNSEEEEEEDPGDIADYYEGVAGDMEQQGADAFDPEEYLFTCL
TYRESQRVLSEQVNSMASALKVLPSVAKLVLVHFHWQLTDILERHKSNSTQLLLDAQVQA
APCNPAPPHSSLHCGVCLQLVRKESLLSLPCQHPFCKSCWEQHSTVLVKDGVGVGISCMA
RGCPLRMPEDFVLPLLPSEELREKYRRYLFRDSVESHYQLQLCPGADCPIVIQVQEPRAR
RVQCSRCSEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKCNICIE
KNGGCNHMQCSKCKHDFCWMCLGDWTHGSEYYECSRYKENPDIVNQSQQAQAREALKKYL
FYFERWENHPAQLEAEIENLSWKVERADSYERGVSLTEGELSSYDRGDLENQMHIAEQRR
RTLLKDFHDT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggacatgaacagccagggctccgagagtaacgaggacttcgatggcaattct
gaggaggaggaggaggaggacccgggggacatcgcggattattacgagggcgtcgcagga
gacatggagcagcagggggctgatgccttcgaccccgaggagtacctgttcacctgcctc
acctaccgggagagccagagagtgctgagtgagcaggtgaacagcatggcctccgcactc
aaggtcctgccttcagtagctaaactggtcctagtgcatttccactggcagctgactgat
atcctggagaggcacaagtccaattccacacagctgctgctggatgcacaggtgcaggcc
gccccctgtaaccctgcgccccctcactcctctctgcactgcggagtctgcctgcagctc
gtcaggaaggagagcctgctctccctgccctgccagcaccccttctgcaagagctgctgg
gagcagcactccactgtgctggtcaaggatggggtgggagtcggaatctcctgcatggct
cgggggtgcccgctgcgcatgccagaggacttcgtgctcccgctgctgccgagcgaagag
ctgagagagaaataccggcgctacctcttcagggactccgtggagagtcactaccagctg
cagctgtgtccgggagcagactgccccatcgtgatccaggtgcaggagccacgggctcgc
agagtgcagtgcagccgctgcagtgaggtcttctgcttcaagtgtcgtcagatgtaccac
gcccccacggactgtgcaaccatcaggaagtggctgacgaaatgtgctgacgactcggag
accgccaactacatcagcgcacacactaaagactgccccaaatgcaatatctgcattgag
aagaatggcggctgcaatcacatgcaatgctccaaatgcaaacacgatttctgctggatg
tgcctgggcgactggactcacggcagcgagtattacgaatgcagccgctacaaagagaac
cctgacattgtgaaccagagccagcaggcgcaggcccgcgaggcgctcaagaaatacctc
ttctacttcgagaggtgggaaaatcacccagcccagctggaggcggagattgagaatctg
tcctggaaggtggagcgagccgacagctatgagcgcggagtgagcctcaccgagggggag
ctgtccagctacgacaggggggatttagaaaatcagatgcacatcgcagagcagaggaga
cggacgctgctgaaagacttccacgacacctga
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