Polyodon spathula (Mississippi paddlefish): 121328357
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Entry
121328357 CDS
T07273
Name
(RefSeq) mitochondrial ubiquitin ligase activator of NFKB 1-like
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121328357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121328357
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121328357
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121328357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
zf-RING_2
Prok-RING_4
DUF6377
COX4
DUF5683
Retrotran_gag_2
zf-RING_5
DUF6773
UFL1_C
Motif
Other DBs
NCBI-GeneID:
121328357
NCBI-ProteinID:
XP_041128914
LinkDB
All DBs
Position
16:complement(19586773..19597928)
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AA seq
353 aa
AA seq
DB search
MMENSARPSTTQIILLATSSAFTAFFYSVYRKKSGSACRLKEATQISIDQDLKNILSAAP
GKCVPYAVIQGVVKSVKETLSSQFVDNCKGVIERLTLQEHKMVWNRTTHLWNDCEKKIHQ
RTNMVPFDLVSHDDSVDMAVRVLKPLDAAELDLEKVYETFHPTVQSFTDVIGHFISGERP
KGIQETEEMLKVGATVTGVGELVLDRNIIKLQPPKQGMQYYISQCDYESLLQKQQSSVKI
WKILTVVFGIATCATLFFILRKQYRHYKEQKRQKSIQEEFREMQSQRFREMNLEEDLISR
NACIICLSCDRSCVFLECGHVCSCDECYQALPTPKKCPICRSAISRVVPLYSS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaacagtgcaaggccttcaacaactcaaatcatccttcttgccacaagttca
gctttcacagcatttttttactctgtctacagaaagaaatcaggctcagcatgcagatta
aaggaagcaacacaaatttcaatagatcaagatctgaaaaatatcctctctgcagcacca
gggaaatgtgtcccatatgcagttatccaaggtgtggttaaatcggttaaggaaaccttg
agtagccagtttgtggacaactgcaaaggagtcattgaaagactgactttacaggagcac
aaaatggtctggaatcgcacaacccatctgtggaatgactgcgaaaagaagattcatcag
cgcacgaacatggtgccctttgacctggtgtcccatgacgacagtgtggacatggctgtg
agggttctcaaaccactggacgcagctgaactagaccttgaaaaggtgtacgagacgttc
caccccacagtccagtccttcactgacgtaatagggcatttcatcagcggggagcggccc
aaaggcatccaagaaactgaagagatgctaaaagttggagcaactgtaacaggagtaggg
gaactggtactggatagaaacattataaaactacaacccccaaagcagggaatgcagtat
tacatcagccaatgtgattatgaatcactcctgcagaagcaacagtccagcgtgaaaatc
tggaagatcttgactgttgtttttggcatcgccacctgcgccactctgttttttatattg
agaaaacaatatcgacattacaaggagcaaaagagacagaaaagcatacaggaggagttt
agggagatgcaaagtcagcgtttcagagagatgaatttagaggaagacttgatttccagg
aatgcatgcattatctgtctgagttgcgacaggtcttgcgtgttcttagaatgtggacat
gtttgctcctgtgatgaatgctaccaggctttgcccactcctaaaaaatgtcccatttgt
agaagtgctatttctagagtggttcctttgtacagtagttaa
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