Polyodon spathula (Mississippi paddlefish): 121328377
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Entry
121328377 CDS
T07273
Symbol
nkx1.2lb
Name
(RefSeq) NK1 transcription factor related 2-like,b
KO
K09309
homeobox protein Nkx-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121328377 (nkx1.2lb)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121328377 (nkx1.2lb)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121328377
NCBI-ProteinID:
XP_041128981
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Position
1:102640676..102645254
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AA seq
385 aa
AA seq
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MNVSRDTVQVSDLSSPAPAVAVAASEGLPCNIHAESMDSHGEQRLSGNELSVYSCPANRD
RQQGDNQGNSPGHEVAVVVPPTVHRTTSFSVLDILDPNKFISKKRHSSSIPYRDNNNFLL
GAENRGAEDSALEIADQKVLSDDYDSCKKSTDLINGVLYKSEECENDFSRGTHTPESDTQ
DEELCSEESSSGLQGSGDGDLGHREEGDSVGQQQPGQNGQSQQAKPKRKRTGSDSKSGKP
RRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP
GADTSAPTGGGGGSAPGSGLGGGLSLSPSPPMGGQLSMHTGYPGHAPGGLVCTAQLPFLP
SHAVLSPFVLGSQAYGAPAFYTSHL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgagcagagacacggttcaggtgagtgacctctcttctccagctccggcggtg
gccgtagccgcttcagaagggttgccctgcaacattcacgccgaaagcatggacagtcac
ggggaacagagactttcaggcaacgagctgtcggtttactcatgccctgccaacagagac
agacagcaaggggacaatcagggcaactcgccgggacatgaggtggccgtggtggtgcca
ccaactgtgcacaggaccacctcgttttcagtactggacattttggaccctaacaaattt
atcagtaaaaagcgccacagttccagtattccttacagagacaacaacaattttctactg
ggagccgagaacagaggtgccgaagactcagctctagaaattgcagatcagaaagttctc
tctgatgattatgactcgtgcaaaaagtcaacagatttaatcaacggagtgttgtataaa
tccgaggaatgtgaaaatgatttcagcagaggtacgcacactccagagagcgacacgcag
gacgaggagctgtgcagcgaggagagcagcagcggcctgcagggttcgggggacggggat
ctaggacaccgagaagagggcgattcggtgggtcagcagcaaccaggacagaacggccag
agtcaacaggccaagcccaagaggaaacgcactggttcagattccaagtcgggcaaaccc
cggcgggcccggacagccttcacctacgaacagcttgtagctctcgagaataaattcaag
tccacccgctatctgtcagtctgcgagagactgaatctggctctttcactcagtctgaca
gagacccaggtgaaaatttggttccagaaccgccggaccaagtggaagaagcaaaaccct
ggcgctgacaccagcgccccgacagggggaggcggcggtagcgcaccagggagcgggctt
ggtggtggtttgagtctgagcccttctcctccaatgggtggccagctctcgatgcacacc
ggttacccgggtcacgcaccgggcggactggtctgcactgcccagttgcccttcttgcca
agccacgcagtcctgtctccgtttgttttgggatcacaagcctatggggccccggcgttt
tatacttcacacctgtaa
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