Polyodon spathula (Mississippi paddlefish): 121328406
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Entry
121328406 CDS
T07273
Name
(RefSeq) nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121328406
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121328406
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GFIT
Other DBs
NCBI-GeneID:
121328406
NCBI-ProteinID:
XP_041128980
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Position
16:complement(7626389..7699409)
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AA seq
1441 aa
AA seq
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MNEGVCLRSAGPGPCTVPEWRSVSEKHVGIPPHIQRCRLTQERSEGFQLVLKNLEGTPIR
QKLLEGFQGVHYQLRVSLFDVTYRHFFGRTWRSPARQLRSLPGHPPRVSFNEVVYFHTSL
IYPNIVAVVEVVAVAQKQNGSQYALSCGFGILRLFISHTDPVESSDAKLDKRLHLYHGTP
RALLSPELQDPIEKNEFMTLIEGAHVQCSMRPHPALERVMHLLPQNMLVSGAEIIPGVVP
PTKEVVDCLQKPRIWKTVTCYLDKLSLSLYPSLERFEEELLELLNTDRLNREDSGPDGNS
VVVQERRVHIAVHNGWGFVDKPQVVVVEPEAEGARGRTGSLIKNRGSLSRLGSSAQHMLV
LRSRVQLKEMVNHPAFVITFHLEYVFSAPTGGEGKMSSTSSLSKTAYMQSVRWAVWNPFL
EAGNSEVSLSLQGGPLPNPNNVMVYKAPSTDMRSPEVKELERGTLRVRFSSHQEGRPPSP
APERKPPSSALRRSVSQVQDSPPKSPPGPGLSISQLSVNPRYPTISHSTASPWQQQFPSQ
LYPSPMAGLYQMSHAELPFASSIAHLEADLSCSAEQSNSPCTEQLQELPFNPVHAPVIAL
GTQVSSARATISRSSLVRLHSSGFPEILDCNNQAAEVVDPAEPVNFSPSGEESDYLQCNE
IILQFLAFTRTPQEGMKTDWLKSVYFTFQLYRFPPVTSQQLLLVNTDRTPSRSGDPAPCI
LVQVNKDGTVNSGSPGLQLKYMVDPGFLKLGEQRWFVRYLALQTLQIDVWDAESLLLIGS
SAVELKHLLRQGRAAVQVIHELEVITTEYVQDSVSVSHHGRVNAIGVSTIVKGTLHLRLG
NVGHLLEHRLKHTDSLPPSLSRVVSSHDSISGFTGGSLSSTSISNLNAKNASHARRLPDI
DGELASMLCSRMKEASIAMQHASRETDSTRQRKLERMMAVRQYEAKEGDTMPYVMTRREE
QIQHSRDLQIIEAYRERSKAESITKMLSLAITTQHTVYATLGTAEFFEFALRNPSNTQHT
VTIEFKDPELSVIVDTREWRHFKELSKTLTPLEEDMFHLEGNTLRPQVYLRPKETVYIPF
KYQTFNADHVVMTQGPTDLRLSRSANVIDSHQSKTVQAKIIRVSFRAEDGKPLAICQVNV
EPTPNVIDQTFRFYHPELTFLKKSIRLPPWHTLPGTPVGVSSGEPQIYVRCSDPNVICET
KKMAPGEPQDVFLKVAGGPSPQIKKFFITIFTDPWLAAPIQIWQLYVHCLQRVDVSCVTG
QLTRLSLVLRGTQTVRKVKCYSSHPHQLQIDPADVFVLPPNAVQDLHIGVRPQKAGSKFL
YLNVVDVDYHQLVSSWLVCVSCKHPLISKAFEISLSAGKGSNKKITYTNPYPTRRAHFLC
TNRMDLLQFKEDAFEIGGGETYTIGLRFAPSQSTGEEEILIYINDQEHKNEETFCVKVVY
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaggtgtctgtttgcgttctgctggacccggcccctgcacagtgccagagtgg
cggagcgtttctgagaaacatgtgggaatcccgcctcacattcagagatgcaggctgacc
caagagaggtcagaggggtttcagcttgtcttgaaaaacctggaaggtacgccaatcaga
cagaaactcctggagggtttccagggggttcattaccagctccgggtctcgctcttcgat
gtcacctaccggcacttttttgggaggacgtggaggagtcctgcaaggcagctgaggagc
ttaccagggcacccccccagagtgtcctttaacgaggttgtttatttccacacctctctc
atctacccgaacatcgtggccgtggtggaggtggtggccgtggcacagaaacagaacggt
tctcaatatgcgctgtcctgtggcttcgggattctgcgcctcttcatcagccacacggat
cctgtggagtcttccgacgccaagctggacaagagattacatctctaccatgggacaccc
agagccttgctgagcccagaactgcaagaccccattgaaaagaatgagttcatgacactg
atcgaaggggctcatgttcagtgctctatgcggccccatcctgccctggaaagggtcatg
catcttctccctcagaacatgctggtgtccggagcagagatcattccaggggtggtgcct
ccaacaaaagaagttgtggactgcttgcagaagccacgtatctggaagacagtgacctgc
tacctggataagctgtctctcagcctgtatccctcccttgagaggttcgaagaagaacta
ctggaacttctgaacacagacaggcttaacagggaggactcgggtccggatgggaattca
gttgtagtccaggagcgccgggtgcacattgctgttcacaacggctggggcttcgtggac
aaaccccaggtggtggtggtggaacccgaggccgagggggcgagggggaggacggggagc
ttaatcaagaatcggggctctctatccagactcggctcctctgctcagcacatgctggtc
ctaagaagccgtgtgcagctgaaggagatggtgaatcaccctgccttcgtcatcaccttc
catttggaatatgtcttctcagcaccgacaggcggggaaggcaagatgtcctccacctct
tctctctcaaagacagcctatatgcagtctgtgcgctgggccgtttggaacccctttttg
gaagcagggaattctgaagtcagcctgtcattacagggaggacccctgccaaaccccaac
aatgtgatggtgtacaaggccccctctactgatatgcgctcccctgaggtgaaggagctt
gagcgcggcactctgagggttcgattctcatcccaccaggagggacgcccccccagccca
gccccagaaaggaaacccccgtcttctgcacttcgtcggagtgtttcccaggtccaggat
tcccctcccaaatctccacctggccctggtctgtctatatcccagctctctgtaaacccc
cgttacccaacaatcagccactccacagcgtctccatggcaacagcagtttccctcccag
ctatacccatccccaatggcaggactctaccagatgtcacatgctgagttgccgttcgcc
agcagtatcgcccacctggaggctgacctgagctgctcagctgagcagtctaactccccc
tgcacagaacagctgcaggagctgccgttcaaccctgtgcatgcgcccgtcatcgccttg
ggaacccaggtgtccagcgccagggctactatctcacgaagctcactggttcggctccac
tcctctggttttcctgagatcctagactgtaacaaccaagcagctgaggttgttgatcct
gctgagccggtcaacttcagccccagcggagaagagtctgactatctccagtgcaatgag
atcatcctccagttccttgcatttaccagaacgcctcaggaagggatgaagacagactgg
ctgaagtctgtttatttcacgttccagctgtaccgcttccctccagtcacctctcagcag
ctgctgctggtgaacacagacaggactccaagcagatcgggggacccagccccctgcatc
ctggtccaggttaacaaagatggaacagttaactctgggtccccagggttgcagctgaag
tacatggtggaccctggcttcctgaagctaggtgaacagcgctggtttgtccgctacctc
gcccttcagactctgcagattgatgtatgggacgcagaatccttgcttctcattggttcc
tcagctgtggaactcaagcatttactgcgtcagggaagggctgcagttcaggtgatccat
gagttggaggtcatcacaacagaatatgtccaggactctgtgagtgtctctcatcacggt
cgtgtgaatgccattggtgtgtccaccatcgtgaaggggacactgcatctacgcttgggc
aatgttggacacctcttggagcacagactgaagcacacagactctctgcccccgtctctc
tcacgggtcgtgtcctcccatgacagcatcagcggcttcacaggaggcagcctgtcctct
acaagcatctccaacctcaacgcaaagaacgcctcgcatgcccgccgcttgcccgatatt
gacggggagctggcgtccatgctgtgcagccgaatgaaggaggccagcatcgccatgcag
cacgccagcagggagacggacagcacccgccagcgcaaactggagaggatgatggcagtg
cggcagtacgaggcaaaggagggtgacacaatgccctacgtcatgactcgtcgggaggaa
cagatccagcactcccgcgacttgcagataatcgaagcttacagggagcgcagcaaagca
gagagcatcaccaagatgctgagtctggccatcaccacccagcacactgtctacgccacc
ctgggcacggcagagttcttcgagtttgccctgagaaacccctccaacactcagcacact
gtcaccattgagttcaaggatccagagcttagcgtcattgtggacacacgggaatggaga
cacttcaaggagctgtcgaagactctcacccctttggaagaggacatgttccacctggaa
ggaaacacactgagacctcaagtctatctccgtcctaaagaaactgtctacatccctttc
aaataccaaaccttcaatgcagaccatgtagtcatgacacagggaccaaccgatctgcga
ttgagcaggagtgctaacgtcatagacagccatcaatccaaaactgtccaggctaagatc
attagggtctcattcagggctgaggatggaaagcctctggctatctgccaggtgaacgtg
gaacccacgccgaacgttattgatcagacgtttcggttttaccatcccgagctcaccttc
ctgaagaaatccattcggctgcctccctggcacaccctaccaggaaccccagttggagtg
tcaagtggggagccccagatttatgtccgatgcagtgaccccaatgttatctgtgaaacc
aagaagatggctccaggtgaaccccaggatgtgtttctgaaagtagccggtggtccaagt
ccgcagattaagaaatttttcatcacaattttcacggatccatggctggctgcccccatt
cagatctggcagttgtacgttcactgcctgcagcgcgtggatgtgagctgtgtgactggt
cagctgacccgcctgtcgctggtcctgcgagggacacagactgtcaggaaggtcaagtgt
tactcctcccacccacaccagctacagattgaccctgcagatgtgtttgtccttcctcca
aatgcagtccaggatctccacattggagtgcggccccagaaggcaggcagtaaattcctc
tacctgaacgtggttgacgtcgactaccaccagctggtgtcctcgtggctggtctgtgtg
tcttgcaagcacccgcttatatccaaggcctttgaaatctcgctgtcagcagggaagggc
agcaacaagaaaattacctacaccaatccgtatcccaccaggagagcgcacttcctctgc
acaaaccgaatggacctgctgcagttcaaagaggacgccttcgagatcggagggggagag
acgtacaccatcggcctgcgctttgcgcccagccagagcacaggtgaggaggagattctc
atttacatcaacgatcaggagcacaagaatgaggagactttctgcgtcaaggttgtgtac
agttaa
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integrated database retrieval system
