Polyodon spathula (Mississippi paddlefish): 121328409
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Entry
121328409 CDS
T07273
Name
(RefSeq) anoctamin-7-like isoform X1
KO
K19501
anoctamin-7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121328409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121328409
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121328409
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Gene cluster
GFIT
Motif
Pfam:
Anoctamin
Anoct_dimer
Claudin_2
Motif
Other DBs
NCBI-GeneID:
121328409
NCBI-ProteinID:
XP_041128986
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All DBs
Position
16:5187014..5205332
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AA seq
903 aa
AA seq
DB search
MYSEGFGTDRDLLLDLGPADQPDCYGSIENDSFMGARYLDEDEDEDPIYIHCERWGTRAS
DPHGNFFRDGRTRIDFVLVWEVRNHSRRKRRARSRYQELGKEEQKSVDSKETKHNRWRDK
FVRNLQNTGLLLEKEETVSDRKTIHFLKLSAPWDVLVYYAEELCMRAPLQAQPNPDLNSS
DQFLKNLWIPNIMSQSVPKKPVDYYTCAFRKSKMAKFLGCEDHDTYFTNTQRHRIVYEIL
ARTAYGKRKRAEIGIERLLNEGAYSAAFPLHEGPFEISTFEVDPEQLNSRQVIFQYWGRW
SKWYKYQPLDHIREYFGEKIAIYFAWLGFYTAWLLPAAAMGTFVFISGIISMGTNTPAEE
ICSSGGTYHMCPLCDACSTWNISDICSMAKLGYLFDHPGTVFFSVFMSLWAVTFLEYWKR
KNATLAHHWDCMDFQEEEERPRPEFAAMAPAMEQNPVTGVKEPYFPEKARLSRMLTGSMV
IVIMLCVVMIFLVTVIMYRGIVSMMMYHTESTVLRTQAGNIANISSSMVNLALILLMGQV
YTALAEQLTKWEMHRTQTQYEDAFTFKVFVFQFVNFYSSPFYVAFFKGRFVGYPGHYGKL
FGMRNEDCGPGGCLIELAEQLFIIMVGKQIIGNIHEFVVPKVKAWLQKRQIGAVRGSRIS
QEPKRWEEDYELIKCEGLFEEYLEMVLQFGFITIFVAAFPLAPLFALLNNWVEIRLDAQK
FVCEYRRPVAERAQDIGVWFNILEALSHLSVIVNAFLIAFTSDFLPRLLYQYKFDSNLHG
YVNFTLAHAPPSYMDGNHTQCRYKSFRDDSGNYTLFYWELLAVRLGFIIAFEHVVFLILR
AIDWIVPDVPESLALKIKRERYLAKQALADNQDAVLRQATSLQAACASGAEQEVEEIELE
EDI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggaggggtttggtacagaccgggatctgttgctggacctgggccccgccgat
cagccagactgctatggcagcattgagaatgacagcttcatgggtgccagatatcttgat
gaagatgaggatgaagaccccatttacatccactgtgagaggtggggcacccgagcctcg
gacccccatggcaacttcttcagggacgggagaaccagaatcgactttgtgctggtgtgg
gaggtgcggaaccacagccgcagaaagaggagagccaggagccgctaccaggaactgggg
aaggaggagcagaagagcgtggacagcaaggagaccaagcacaaccgctggagggacaag
tttgtgaggaacctgcagaacacagggctgctgctggaaaaggaggagacggtgagcgac
agaaagaccattcacttcctaaagttgagcgccccctgggacgttctggtgtactacgca
gaggagctgtgcatgagagctcccctacaggcacagccaaaccctgatctgaactcctca
gaccagttcctgaagaatctctggatccccaacatcatgtcccagtcggtccccaaaaag
ccagtcgattactacacctgcgcctttcgcaagtccaaaatggcaaagtttctgggctgc
gaagatcatgacacctatttcacaaacacacagagacaccgaattgtgtacgagattctg
gcccggacggcttacgggaaacgcaagcgcgctgaaatcgggattgagaggttactgaac
gaaggagcgtattcagctgctttcccacttcatgagggccccttcgagatttcaacgttt
gaggttgacccggagcagctgaactctcggcaggtcatcttccagtactggggccgctgg
tccaaatggtacaagtaccagccactggaccacatccgcgagtactttggggagaagatt
gctatctacttcgcctggcttggtttctatacagcctggctcctccctgctgctgcgatg
ggcaccttcgtcttcatttctggcatcatctccatgggaaccaacacccctgctgaggag
atttgctccagtggggggacctatcacatgtgcccactctgtgacgcctgcagcacctgg
aacatctcggatatctgctccatggccaagctggggtacctgtttgatcacccagggaca
gtgttcttcagtgtcttcatgtcactctgggccgtgacgtttctggagtactggaagagg
aagaacgccacgctggctcaccactgggactgcatggacttccaggaggaggaggagcgc
cctcgtcccgagtttgctgcgatggcgccagcgatggaacagaaccctgtgactggagtg
aaggagccctacttcccagagaaagctcggctatcccgcatgctcaccgggtccatggtc
atcgttatcatgctctgcgtggttatgatattcctggtgactgtaatcatgtatcggggg
atcgtcagtatgatgatgtatcacacagaaagcaccgtcctccgcacacaggctgggaac
attgctaacatctccagcagcatggtgaacctggctctgatcctgcttatgggccaggtc
tacactgcactggcggagcagttaaccaagtgggagatgcaccgcacccagactcagtac
gaagatgccttcactttcaaagtgtttgtgttccagtttgtcaatttctattcttctcct
ttctatgtggcattcttcaaaggcaggtttgttgggtatcctgggcattacggcaagctg
tttggaatgcgcaatgaagattgtggtcccggcggttgtctaattgaactggctgagcaa
ctcttcatcatcatggttgggaagcaaatcatcggcaacatccatgagtttgttgttccg
aaggtgaaagcctggctgcagaagcgtcagatcggagctgtgcgagggtctcggatctct
caggaacccaagcgctgggaggaagactacgagctgatcaagtgtgaggggctcttcgag
gaatatctggagatggtcctccagtttgggttcatcaccatcttcgtggcagcgttcccc
ttggctccgctcttcgctctgctcaataactgggtggagatccgccttgacgcccagaag
tttgtctgcgagtaccgtcgtcctgtggcggagcgagcccaggatattggggtgtggttc
aacatcctggaggccttgtcccacctttctgtcattgtcaatgcttttctgattgccttc
acatccgacttcctgccgcgactcctctaccagtacaagttcgacagcaacctgcacggc
tacgtcaacttcaccctggcccacgctccacccagctacatggatgggaaccacactcag
tgcagatacaagtcgttccgagatgacagtgggaactacaccctcttctactgggagctg
ctggcggtgcgcttgggcttcatcattgcctttgagcatgtggtgtttctcatcctccgt
gccatcgactggatagtgccagacgtcccagagtccctggcactcaagatcaagcgagag
cgctacctggccaagcaggccctggctgacaaccaggatgctgtcctgaggcaagcgacc
tctctccaagcagcatgtgctagtggggcggagcaggaagtggaggaaattgaactggaa
gaggatatttga
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